Gene
| Gene Model ID | pfu_aug2.0_995.1_18011 |
|---|---|
| Locus | scaffold995.1 : 194579 ... 205157 : + |
| To GenomeBrowser | scaffold995.1:194579..205157 |
| Genes list of scaffold | scaffold995.1 |
| Synonym | pfu_aug1.0_8584.1_38790 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| upf0769 protein c21orf59 homolog | GO:0005737 GO:0060271 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_995.1_18011.t1 | 1 | 1 | DUF2870 | 38 | 104 | 1.2e-30 | 105.4 | 3.1e-34 | 1.5e-30 | 105.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_995.1_18011.t1 | gi|736226458|ref|XP_010781322.1| | PREDICTED: UPF0769 protein C21orf59 homolog [Notothenia coriiceps] | 0.0 |
| pfu_aug2.0_995.1_18011.t1 | gi|82085345|sp|Q6DRC3.1|CU059_DANRE | UPF0769 protein C21orf59 homolog | 0.0 |
| pfu_aug2.0_995.1_18011.t1 | gi|41056129|ref|NP_956382.1| | UPF0769 protein C21orf59 homolog [Danio rerio] | 0.0 |
| pfu_aug2.0_995.1_18011.t1 | gi|584010444|ref|XP_006800154.1| | PREDICTED: uncharacterized protein C21orf59 homolog [Neolamprologus brichardi] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_995.1_18011.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_995.1_18011.t1 atgattgtttatcccatgaatttaccaccccacgatccaatcagaatggaaattgaaaatacagaggacttagcaggcac gcaggcatcactagaggtaataatggaagatgaggcctcactttggttctgtgggaaagaaatgcagagaggaaaaaaac tcaaagaccatgtcggcaaaaatgagaaaactaaagtcattgcaaagttacaaaagaaaggacaaggtgcaccaggcaga gaacctgttgtaagcgaggaggaacagaaaaaaatgatggcttacgcattcagaaaacaggaagaaatgaag |
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Protein
| Protein ID | pfu_aug2.0_995.1_18011.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_995.1_18011.t1 MIVYPMNLPPHDPIRMEIENTEDLAGTQASLEVIMEDEASLWFCGKEMQRGKKLKDHVGKNEKTKVIAKLQKKGQGAPGR EPVVSEEEQKKMMAYAFRKQEEMK |
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