Gene
| Gene Model ID | pfu_aug2.0_996.1_21323 |
|---|---|
| Locus | scaffold996.1 : 18706 ... 30295 : - |
| To GenomeBrowser | scaffold996.1:18706..30295 |
| Genes list of scaffold | scaffold996.1 |
| Synonym | pfu_aug1.0_9952.1_46127 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| n-acetylneuraminate lyase | GO:0003824 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_996.1_21323.t1 | 1 | 1 | DHDPS | 13 | 301 | 0.0 | 162.5 | 0.0 | 0.0 | 162.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_996.1_21323.t1 | gi|562825375|ref|XP_006142401.1| | PREDICTED: N-acetylneuraminate lyase [Tupaia chinensis] | 0.0 |
| pfu_aug2.0_996.1_21323.t1 | gi|544398811|ref|XP_005540235.1| | PREDICTED: N-acetylneuraminate lyase isoform X1 [Macaca fascicularis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_996.1_21323.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_996.1_21323.t1 atgggagaaacaggaaagtttgatggctttcgtgtcaccggtacaacagctgctccctttactcctttcaaagaagacgg ggaggtgaattatgatttgatcagcaaatgtgttgattttctgaaaaacaaccattttgaatatgcctttgtaaacggta cgctggcagagggattgtcgatgacattagaggagaggaagaaagtggcagaggcatggaaatctgcatcagaaggaaag attaagctaatacttcatataggaacaaattgtctgaaagactcacaagaactggcacgtcatgcacaacagattggtgt ggaggctgtggcagcattgtgtccgtttttcctcaaacctgaatcagaagaaattctggtagattatatagagcaagttg cgaaggaagctccaaaattaccattcttttactatgccatcaactttttcacgggaatctacctgaacgattccaaattt ctcagactcgccaaagataggattcccaatttatgtggactgaaacactcgtcaagagaattacctaatgccttcgactg caagttggtggacaaaaagtttcaagtcctgatgggaactgataaccaattcctgacctgcctgagtctgggcctcgatg taccggttaccgctccattcatggggaaattgtaccatgaaataaaagcagcgtttgacaaaggggatatcgacgaagct cgaaaaatacagataaaagtgcagaaagtgaacaatattaggcaactttatggtggaggaatagaagcagccaaagttat tttcagtatcacttccggtatagactgcggaccagtcaggttgcctctgacgaatttctcagcagacagaaaagctagtt tagcaaaagatttaaaggagtctggtctgttctcatga |
|
Protein
| Protein ID | pfu_aug2.0_996.1_21323.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_996.1_21323.t1 MGETGKFDGFRVTGTTAAPFTPFKEDGEVNYDLISKCVDFLKNNHFEYAFVNGTLAEGLSMTLEERKKVAEAWKSASEGK IKLILHIGTNCLKDSQELARHAQQIGVEAVAALCPFFLKPESEEILVDYIEQVAKEAPKLPFFYYAINFFTGIYLNDSKF LRLAKDRIPNLCGLKHSSRELPNAFDCKLVDKKFQVLMGTDNQFLTCLSLGLDVPVTAPFMGKLYHEIKAAFDKGDIDEA RKIQIKVQKVNNIRQLYGGGIEAAKVIFSITSGIDCGPVRLPLTNFSADRKASLAKDLKESGLFS |
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