Gene
| Gene Model ID | pfu_aug2.0_996.1_21329 |
|---|---|
| Locus | scaffold996.1 : 98226 ... 123492 : + |
| To GenomeBrowser | scaffold996.1:98226..123492 |
| Genes list of scaffold | scaffold996.1 |
| Synonym | pfu_aug1.0_47.1_50585 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| receptor-type tyrosine-protein phosphatase partial | GO:0004725 GO:0035335 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_996.1_21329.t3 | 2 | 1 | Y_phosphatase | 534 | 763 | 0.0 | 281.2 | 0.0 | 0.0 | 266.6 |
| pfu_aug2.0_996.1_21329.t3 | 2 | 2 | Y_phosphatase | 823 | 858 | 0.0 | 281.2 | 2.4e-05 | 0.03 | 13.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_996.1_21329.t3 | gi|676422805|ref|XP_009044005.1| | hypothetical protein LOTGIDRAFT_102205 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_996.1_21329.t3 | gi|676457665|ref|XP_009054725.1| | hypothetical protein LOTGIDRAFT_118033 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_996.1_21329.t3 | gi|733917251|ref|XP_010720654.1| | PREDICTED: receptor-type tyrosine-protein phosphatase T [Meleagris gallopavo] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_996.1_21329.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_996.1_21329.t1 atgcatatgcatgcattatcaggaggtctaatcagtacgggctatactcaccgtgactcgttcatcgtgacccagatgcc tttacctaacactgtggctgacttctggagaatgatgtatgattataactcacatacagttatcatgcttaatgagttta acagaaatgatgagacatgtgccttatactggccagaggagtatggttatactgtagagtatgatcctctcagtatcgag cttctgtcgtcaacagaggataataacgtctccgtcaggatcttcaagctgagtaaccacatcaagaaggaggagcgagc tatcaaacaattccagctaaactcttggccagattcccgtaaagtgcctggcacaactaactccctgatgcagcttatag aaatggtgtatgactggttaaaacagaacggtaaaggacccctgactgtacactgcatgaatggagcaagtaagagtgga ttgttttgtgctgtaaatctgctgtttgagagaatgcagagagatatagaggtagacgtgtatcaaacggtcaaaaccat cagaatcaacagaccacagtttatagaggatgtggagcagtatcagtttatataccagatggccttagagtacctggatt ataccggcagatag |
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| Transcript ID | pfu_aug2.0_996.1_21329.t2 |
| Definition | - |
>pfu_aug2.0_996.1_21329.t2 atgaaaacaaaacagaaagtagtcataatcattctattatcgattggatattgttatgcagaatgtccagatggaaaatt tggatggaagtgtaaatttacatgttattgtgctaacactacagaagcttgtggtaaattgaaaggggattgcttaagtg gttgtcgtagcaacagatatggaccaggatgtcaacttttgacggcatttaaatatgatgttcgcggacatggttatcgt ggtaaagaatccttcactgaagatgggacaaaatgtgatagctggaacaaagaggtatatgtaaagttatactctctcaa acctgaacagtttccagataacgaaattccaggggcagtttgtcgtaacccagaaaacagcaatttaagatttaatgagg caaaacgtggtccatggtgttttacagacagcagtttcctgtataaaagaagttgcgatatatctcagatagactgtagt gatggtagatttgggacagattgtgccatggagtgtcattgtgccaatgttacagaagtctgcaataaaaagatcggcac atgtagtgttagcggatgtcaccctggttggataggaacatcatgccaagaaagttgtagagatggtacttatggtaaag actgtcgagaaaagtgtggacaatgtaagattaaaccttgtgattttgaaactggagaatgtagacatggatgtgaggct ggctggaaaggagataagtgtaaaaatgagtgtgaggtaggagagtacggtgagaactgtgtacatagatgtggattctg tcttaacggcacatgtgaccccagaaacggctcctgttacggaggactctgtcaggatgggtaccagggcgtcaagtgtg atcagccatgcacacgaggcttttatggtagaaattgtacagagatatgtggaaactgtaagaacagtgcgtgtcggcat acagatggagtttgtatggacggatgttacccaggatggactctcaggaactgtactctctcctgtcagagttttacaca tggagagaactgttcgtattcatgtggtaaatgtaaggattctcaaccctgtcaccatgaaaccggtgtgtgcatgaacg gttgtcaccaacagtacaccggaccacagtgtgtagtggctctacaaacagaggatcagtcagagggcggggcaggaggg gttataggggccgtggtggcagtccttgttgtcatcatcatcgctgttatcatcattttcatcgtttacaggaggagaag taagggaagatggaatgtccgtgaacatgaggaagagagcagacagaaagaactggtcaatacaaaggaaacggacaaat tactgcaaggagaggctgtagtagtagacaccttggaggacactgaccctaacgataaccttaatgaaccaatctatgct aatgtcaacactaaacgacagagtgaaccaatcaaaatagctgatttatatgactacatccgtagtaacaagaaaaatga atgtgaaggattcaagaaagaatttgctgaacttcctattggactaatggctctttgtgagacggccaaaaaacccgaaa atcggccgaaaaacagatacggaaatatcactgcatatgatcattcccgagtggtactagaaccattacctaacgaacca aactctgattacattaacgctaattacatggatggctacacatcagacaaagcttacattgcatcacagggtcctaccaa ggtaatgatccgtgacttctggagaatggtatggcagaaaaggatatgtaagattgtcatgttaaccaatcttatggagg cgtgtaagaaaaaatgtgagcagtactggccagaggagggtacccagaaatacggtgacatcactgtggagatactagac acggcactgtttactgactataccatcagaacgttcaggattgcttcagctggatcaagtcggatagtaaagcagttcca ctttactagctggtctgaccatggagctctgacgtaccccacaccgttactggccttcaaacgtaaagttaagatgtaca gtcccgatagcaaggcacctattgtagtacactgcagtgctggtattggtagatcgggaacatacatagctatagattac ttgttagagcaggccaaagccgaggacttggtggacgtactcaaatatgcccagctgatgagaaccaatagaactaatat gatacagacatgggagcagtatgtatttgtgtacgaggcattactagaggctataaaggcaggggagacgactataccga actctggattccgtgccaagtatgaggagctgtgtacaaaacccgcagacaaatctaaaacaccactagaggaacagttt gaagttctccagttaataaccccgactgtagagagttcccagtacaaggccgccatagatcctgaaaatatcaacaaaaa ccgtgtcaaaaatgtacttcctgccaatcggtgcagaccttacctgtatacccaggtggatggatgtaatgattacatta atgctgtttttctgccgggctatactcaccgtgactcgttcatcgtgacccagatgcctttacctaacactgtggctgac ttctggagaatgatgtatgattataactcacatacagttatcatgcttaatgagtttaacagaaatgatgagacatgtgc cttatactggccagaggagtatggttatactgtagagtatgatcctctcagtatcgagcttctgtcgtcaacagaggata ataacgtctccgtcaggatcttcaagctgagtaaccacatcaagaaggaggagcgagctatcaaacaattccagctaaac tcttggccagattcccgtaaagtgcctggcacaactaactccctgatgcagcttatagaaatggtgtatgactggttaaa acagaacggtaaaggacccctgactgtacactgcatgaatggagcaagtaagagtggattgttttgtgctgtaaatctgc tgtttgagagaatgcagagagatatagaggtagacgtgtatcaaacggtcaaaaccatcagaatcaacagaccacagttt atagaggatgtggagcagtatcagtttatataccagatggccttagagtacctggattataccggcagatag |
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| Transcript ID | pfu_aug2.0_996.1_21329.t3 |
| Definition | - |
>pfu_aug2.0_996.1_21329.t3 atgaaaacaaaacagaaagtagtcataatcattctattatcgattggatattgttatgcagaatgtccagatggaaaatt tggatggaagtgtaaatttacatgttattgtgctaacactacagaagcttgtggtaaattgaaaggggattgcttaagtg gttgtcgtagcaacagatatggaccaggatgtcaacttttgacggcatttaaatatgatgttcgcggacatggttatcgt ggtaaagaatccttcactgaagatgggacaaaatgtgatagctggaacaaagaggtatatgtaaagttatactctctcaa acctgaacagtttccagataacgaaattccaggggcagtttgtcgtaacccagaaaacagcaatttaagatttaatgagg caaaacgtggtccatggtgttttacagacagcagtttcctgtataaaagaagttgcgatatatctcagatagactgtagt gatggtagatttgggacagattgtgccatggagtgtcattgtgccaatgttacagaagtctgcaataaaaagatcggcac atgtagtgttagcggatgtcaccctggttggataggaacatcatgccaagaaagttgtagagatggtacttatggtaaag actgtcgagaaaagtgtggacaatgtaagattaaaccttgtgattttgaaactggagaatgtagacatggatgtgaggct ggctggaaaggagataagtgtaaaaatgagtgtgaggtaggagagtacggtgagaactgtgtacatagatgtggattctg tcttaacggcacatgtgaccccagaaacggctcctgttacggaggactctgtcaggatgggtaccagggcgtcaagtgtg atcagccatgcacacgaggcttttatggtagaaattgtacagagatatgtggaaactgtaagaacagtgcgtgtcggcat acagatggagtttgtatggacggatgttacccaggatggactctcaggaactgtactctctcctgtcagagttttacaca tggagagaactgttcgtattcatgtggtaaatgtaaggattctcaaccctgtcaccatgaaaccggtgtgtgcatgaacg gttgtcaccaacagtacaccggaccacagtgtgtagtggctctacaaacagaggatcagtcagagggcggggcaggaggg gttataggggccgtggtggcagtccttgttgtcatcatcatcgctgttatcatcattttcatcgtttacaggaggagaag taagggaagatggaatgtccgtgaacatgaggaagagagcagacagaaagaactggtcaatacaaaggaaacggacaaat tactgcaaggagaggctgtagtagtagacaccttggaggacactgaccctaacgataaccttaatgaaccaatctatgct aatgtcaacactaaacgacagagtgaaccaatcaaaatagctgatttatatgactacatccgtagtaacaagaaaaatga atgtgaaggattcaagaaagaatttgctgaacttcctattggactaatggctctttgtgagacggccaaaaaacccgaaa atcggccgaaaaacagatacggaaatatcactgcatatgatcattcccgagtggtactagaaccattacctaacgaacca aactctgattacattaacgctaattacatggatggctacacatcagacaaagcttacattgcatcacagggtcctaccaa ggtaatgatccgtgacttctggagaatggtatggcagaaaaggatatgtaagattgtcatgttaaccaatcttatggagg cgtgtaagaaaaaatgtgagcagtactggccagaggagggtacccagaaatacggtgacatcactgtggagatactagac acggcactgtttactgactataccatcagaacgttcaggattgcttcagctggatcaagtcggatagtaaagcagttcca ctttactagctggtctgaccatggagctctgacgtaccccacaccgttactggccttcaaacgtaaagttaagatgtaca gtcccgatagcaaggcacctattgtagtacactgcagtgctggtattggtagatcgggaacatacatagctatagattac ttgttagagcaggccaaagccgaggacttggtggacgtactcaaatatgcccagctgatgagaaccaatagaactaatat gatacagacatgggagcagtatgtatttgtgtacgaggcattactagaggctataaaggcaggggagacgactataccga actctggattccgtgccaagtatgaggagctgtgtacaaaacccgcagacaaatctaaaacaccactagaggaacagttt gaagttctccagttaataaccccgactgtagagagttcccagtacaaggccgccatagatcctgaaaatatcaacaaaaa ccgtgtcaaaaatgtacttcctgccaatcggtgcagaccttacctgtatacccaggtggatggatgtaatgattacatta atgctgtttttctgccgatatccttattgagagttcctcctacagaaatgagaacccatgtcaagagtatcttacttata ccgtcattgacaaagtatctttag |
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Protein
| Protein ID | pfu_aug2.0_996.1_21329.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_996.1_21329.t1 MHMHALSGGLISTGYTHRDSFIVTQMPLPNTVADFWRMMYDYNSHTVIMLNEFNRNDETCALYWPEEYGYTVEYDPLSIE LLSSTEDNNVSVRIFKLSNHIKKEERAIKQFQLNSWPDSRKVPGTTNSLMQLIEMVYDWLKQNGKGPLTVHCMNGASKSG LFCAVNLLFERMQRDIEVDVYQTVKTIRINRPQFIEDVEQYQFIYQMALEYLDYTGR |
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| Protein ID | pfu_aug2.0_996.1_21329.t2 |
| Definition | - |
>pfu_aug2.0_996.1_21329.t2 MKTKQKVVIIILLSIGYCYAECPDGKFGWKCKFTCYCANTTEACGKLKGDCLSGCRSNRYGPGCQLLTAFKYDVRGHGYR GKESFTEDGTKCDSWNKEVYVKLYSLKPEQFPDNEIPGAVCRNPENSNLRFNEAKRGPWCFTDSSFLYKRSCDISQIDCS DGRFGTDCAMECHCANVTEVCNKKIGTCSVSGCHPGWIGTSCQESCRDGTYGKDCREKCGQCKIKPCDFETGECRHGCEA GWKGDKCKNECEVGEYGENCVHRCGFCLNGTCDPRNGSCYGGLCQDGYQGVKCDQPCTRGFYGRNCTEICGNCKNSACRH TDGVCMDGCYPGWTLRNCTLSCQSFTHGENCSYSCGKCKDSQPCHHETGVCMNGCHQQYTGPQCVVALQTEDQSEGGAGG VIGAVVAVLVVIIIAVIIIFIVYRRRSKGRWNVREHEEESRQKELVNTKETDKLLQGEAVVVDTLEDTDPNDNLNEPIYA NVNTKRQSEPIKIADLYDYIRSNKKNECEGFKKEFAELPIGLMALCETAKKPENRPKNRYGNITAYDHSRVVLEPLPNEP NSDYINANYMDGYTSDKAYIASQGPTKVMIRDFWRMVWQKRICKIVMLTNLMEACKKKCEQYWPEEGTQKYGDITVEILD TALFTDYTIRTFRIASAGSSRIVKQFHFTSWSDHGALTYPTPLLAFKRKVKMYSPDSKAPIVVHCSAGIGRSGTYIAIDY LLEQAKAEDLVDVLKYAQLMRTNRTNMIQTWEQYVFVYEALLEAIKAGETTIPNSGFRAKYEELCTKPADKSKTPLEEQF EVLQLITPTVESSQYKAAIDPENINKNRVKNVLPANRCRPYLYTQVDGCNDYINAVFLPGYTHRDSFIVTQMPLPNTVAD FWRMMYDYNSHTVIMLNEFNRNDETCALYWPEEYGYTVEYDPLSIELLSSTEDNNVSVRIFKLSNHIKKEERAIKQFQLN SWPDSRKVPGTTNSLMQLIEMVYDWLKQNGKGPLTVHCMNGASKSGLFCAVNLLFERMQRDIEVDVYQTVKTIRINRPQF IEDVEQYQFIYQMALEYLDYTGR |
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| Protein ID | pfu_aug2.0_996.1_21329.t3 |
| Definition | - |
>pfu_aug2.0_996.1_21329.t3 MKTKQKVVIIILLSIGYCYAECPDGKFGWKCKFTCYCANTTEACGKLKGDCLSGCRSNRYGPGCQLLTAFKYDVRGHGYR GKESFTEDGTKCDSWNKEVYVKLYSLKPEQFPDNEIPGAVCRNPENSNLRFNEAKRGPWCFTDSSFLYKRSCDISQIDCS DGRFGTDCAMECHCANVTEVCNKKIGTCSVSGCHPGWIGTSCQESCRDGTYGKDCREKCGQCKIKPCDFETGECRHGCEA GWKGDKCKNECEVGEYGENCVHRCGFCLNGTCDPRNGSCYGGLCQDGYQGVKCDQPCTRGFYGRNCTEICGNCKNSACRH TDGVCMDGCYPGWTLRNCTLSCQSFTHGENCSYSCGKCKDSQPCHHETGVCMNGCHQQYTGPQCVVALQTEDQSEGGAGG VIGAVVAVLVVIIIAVIIIFIVYRRRSKGRWNVREHEEESRQKELVNTKETDKLLQGEAVVVDTLEDTDPNDNLNEPIYA NVNTKRQSEPIKIADLYDYIRSNKKNECEGFKKEFAELPIGLMALCETAKKPENRPKNRYGNITAYDHSRVVLEPLPNEP NSDYINANYMDGYTSDKAYIASQGPTKVMIRDFWRMVWQKRICKIVMLTNLMEACKKKCEQYWPEEGTQKYGDITVEILD TALFTDYTIRTFRIASAGSSRIVKQFHFTSWSDHGALTYPTPLLAFKRKVKMYSPDSKAPIVVHCSAGIGRSGTYIAIDY LLEQAKAEDLVDVLKYAQLMRTNRTNMIQTWEQYVFVYEALLEAIKAGETTIPNSGFRAKYEELCTKPADKSKTPLEEQF EVLQLITPTVESSQYKAAIDPENINKNRVKNVLPANRCRPYLYTQVDGCNDYINAVFLPISLLRVPPTEMRTHVKSILLI PSLTKYL |
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