Gene
| Gene Model ID | pfu_aug2.0_996.1_21331 |
|---|---|
| Locus | scaffold996.1 : 157896 ... 177325 : + |
| To GenomeBrowser | scaffold996.1:157896..177325 |
| Genes list of scaffold | scaffold996.1 |
| Synonym | pfu_aug1.0_47.1_50583 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| dep domain-containing protein 1a | GO:0005515 GO:0005654 GO:0017053 GO:0045892 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_996.1_21331.t1 | 3 | 1 | DEP | 2 | 71 | 4.8e-10 | 39.0 | 6.5e-14 | 4.8e-10 | 39.0 |
| pfu_aug2.0_996.1_21331.t1 | 2 | 1 | RhoGAP | 237 | 285 | 2.6e-08 | 33.6 | 1.1e-07 | 0.00078 | 19.0 |
| pfu_aug2.0_996.1_21331.t1 | 2 | 2 | RhoGAP | 624 | 660 | 2.6e-08 | 33.6 | 1.7e-05 | 0.13 | 11.8 |
| pfu_aug2.0_996.1_21331.t1 | 3 | 2 | DEP | 697 | 706 | 4.8e-10 | 39.0 | 1.6 | 12000.0 | -3.9 |
| pfu_aug2.0_996.1_21331.t1 | 3 | 3 | DEP | 778 | 791 | 4.8e-10 | 39.0 | 0.98 | 7300.0 | -3.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_996.1_21331.t1 | gi|736164734|ref|XP_010764190.1| | PREDICTED: DEP domain-containing protein 1A [Notothenia coriiceps] | 0.0 |
| pfu_aug2.0_996.1_21331.t1 | gi|676422817|ref|XP_009044008.1| | hypothetical protein LOTGIDRAFT_208491 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_996.1_21331.t1 | gi|585659444|ref|XP_006816189.1| | PREDICTED: DEP domain-containing protein 1B-like isoform X2 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_996.1_21331.t1 | gi|585659440|ref|XP_006816188.1| | PREDICTED: DEP domain-containing protein 1B-like isoform X1 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_996.1_21331.t1 | gi|632949769|ref|XP_007890345.1| | PREDICTED: DEP domain-containing protein 1B [Callorhinchus milii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_996.1_21331.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_996.1_21331.t1 atgccagtcagtaggcatagacgatacatgaagacttatgacaaatgtttcaccgctggagaggcagtagattggcttca tgagtacctcaaatctaactgtaattttggtcctgatgtcaccagagctcagacattacagttactacagaagttccatc gtgcacgagtgatcgaagacgtgaggggtggaaagcagaatcgtcccgatgttacagacaacggcagattgttcagatgt agaattccatctcccacaaagccctttaacacattatctaggactccattcagtaatagaactgatttgataaacaagga ccaggtgactaatacaggacctcctgtaaagcttaacctggataaacacctggaatgtcagattcccagctcacaagcta tcccagagtgccatctcgtctccaagcaaccatctgctgcagatatagaaaatatatggaagcacaccactcttgacaag ttacagcaggttcttcacaccagagatttatcagatgtcctggatagcagctttgttgtcggacgtaatatcatgcacaa ctgtctatacatcaacaaaagtggaattgtcaccaatatccagcctaaagaccagcttccacactgggccttgtcagcca tgaagtgtctcgctcattggcctcacaaggttgatgacaatttaccaagttaccctggtttcgagagggacgtgttccgt gtggtgaaggattacttttgtggtcttcctgagccgttatttacgtatgagatgtatgaagtagtcattaatgtctttgt tgctgctgagggcaaatcataccagagagaatcacaagctcaactgtatgaggacagccctgaggctcttacgtcatttg agtcagtagaaaatctcatgttggatttaacaaacactgtacctagtggcaagagttacaggtcaacccctgatgctcga ctaaatcgcatgaatagtgcctccaccattgatctatctcctattcatcctgtttacgatagtgtttcaaaggatagaac tcttaggagatgtgcatcaagcggaaatgtaaaatatgccaaatatgagactgcctttggaccagaaaatagaacaatta cgcgagtgtactacaaaaatggagtcgcaaccgactacagttaccatgatgaggaagattccttgtataagactcctgtc gaaactcattttgaatattcgtctgatatcagcgataaactccaagaaccaattattgatagctatgatacaaatgatgc tgaaatgaactttgctagagtgaaacctatgagaagaaaaaagactaatgaagaccccagcaaagaagatgtacatcatc gcaagagctatggttactctgttgccgctgtgatcaaaccctgtaaacaagatgctcgttcacaaagacgttctgtaggt agtcagcttcctgatgacaaagtgagccgtctagaaggatacacaaaaattaaagtccgagccagacatcattcaagtaa agtggagaaacctcctccttcgtataactcgctctttcccgacaattatcaaccagtgatcaacggaaagcagaaaccaa ggacaataccaaggtcaaagtcaagtcattcactacacaatgtcaatgatggatgcacgcttcctgggtatcatatgaca gagaggctcgactcggcgtcaaatatgatacacaagcccattggtcagtacagccaagggaagagtacagaacccctgcc tgggcgcagtcttagcatgactgatttacttcatggccagactgtaggcaatagtggactgaagagaagcagccatgctg aagatttatcagaagatgacatcctggagaggacaagagacgcacttcagctcgtctgtctgttattaccaccggcaaat agacgtaaactacatctcctgctgaaactaatgagtaagatggctgacaatagggaattacacctggatgataaacagac cactagaaccttgttattggagacgttttcccagtgtatactgagttgtcaggatgagttggagatggaggatttactgg tgatgcgtatcgtctcgtttctgatggacaaccacacccatgtcatggctgtaccggcagatctcaagactgccgctgag gataaactcacaaaatctaagtcacagatcgtgtactcattagacgatccgtcgtctatccattattgtaaacaggttac aaaggaacaatatgatgaacaacgacttagcttctcacagaaagctctggcacatctactagaggagattattaacgaca agacaatgtcatataaagacaagaagaagcgactcaaaacagcaaagaaatgttatggccgtgacaagctcattcggata gtacagacagacggacagaataaaagaggcgaggaaacctatgatcccctctggttccacctatag |
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Protein
| Protein ID | pfu_aug2.0_996.1_21331.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_996.1_21331.t1 MPVSRHRRYMKTYDKCFTAGEAVDWLHEYLKSNCNFGPDVTRAQTLQLLQKFHRARVIEDVRGGKQNRPDVTDNGRLFRC RIPSPTKPFNTLSRTPFSNRTDLINKDQVTNTGPPVKLNLDKHLECQIPSSQAIPECHLVSKQPSAADIENIWKHTTLDK LQQVLHTRDLSDVLDSSFVVGRNIMHNCLYINKSGIVTNIQPKDQLPHWALSAMKCLAHWPHKVDDNLPSYPGFERDVFR VVKDYFCGLPEPLFTYEMYEVVINVFVAAEGKSYQRESQAQLYEDSPEALTSFESVENLMLDLTNTVPSGKSYRSTPDAR LNRMNSASTIDLSPIHPVYDSVSKDRTLRRCASSGNVKYAKYETAFGPENRTITRVYYKNGVATDYSYHDEEDSLYKTPV ETHFEYSSDISDKLQEPIIDSYDTNDAEMNFARVKPMRRKKTNEDPSKEDVHHRKSYGYSVAAVIKPCKQDARSQRRSVG SQLPDDKVSRLEGYTKIKVRARHHSSKVEKPPPSYNSLFPDNYQPVINGKQKPRTIPRSKSSHSLHNVNDGCTLPGYHMT ERLDSASNMIHKPIGQYSQGKSTEPLPGRSLSMTDLLHGQTVGNSGLKRSSHAEDLSEDDILERTRDALQLVCLLLPPAN RRKLHLLLKLMSKMADNRELHLDDKQTTRTLLLETFSQCILSCQDELEMEDLLVMRIVSFLMDNHTHVMAVPADLKTAAE DKLTKSKSQIVYSLDDPSSIHYCKQVTKEQYDEQRLSFSQKALAHLLEEIINDKTMSYKDKKKRLKTAKKCYGRDKLIRI VQTDGQNKRGEETYDPLWFHL |
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