Gene
| Gene Model ID | pfu_aug2.0_9971.1_06419 |
|---|---|
| Locus | scaffold9971.1 : 2626 ... 6526 : + |
| To GenomeBrowser | scaffold9971.1:2626..6526 |
| Genes list of scaffold | scaffold9971.1 |
| Synonym | pfu_aug1.0_2434.1_30117 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| serine threonine-protein kinase nek4- partial | GO:0016772 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_9971.1_06419.t1 | 1 | 1 | Pkinase | 15 | 166 | 2.10195e-43 | 148.3 | 0.0 | 2.39622e-43 | 148.1 |
| pfu_aug2.0_9971.1_06419.t1 | 1 | 1 | Pkinase_Tyr | 15 | 167 | 1.1e-31 | 109.9 | 2.6e-35 | 1.3e-31 | 109.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_9971.1_06419.t1 | gi|602675015|ref|XP_007442993.1| | PREDICTED: serine/threonine-protein kinase Nek4-like [Python bivittatus] | 9.80909e-45 |
| pfu_aug2.0_9971.1_06419.t1 | gi|695145483|ref|XP_009500133.1| | PREDICTED: serine/threonine-protein kinase Nek4-like, partial [Phalacrocorax carbo] | 5.04467e-44 |
| pfu_aug2.0_9971.1_06419.t1 | gi|260816082|ref|XP_002602801.1| | hypothetical protein BRAFLDRAFT_227132 [Branchiostoma floridae] | 2.99878e-43 |
| pfu_aug2.0_9971.1_06419.t1 | gi|542183970|ref|XP_005469392.1| | PREDICTED: serine/threonine-protein kinase Nek4-like isoform X3 [Oreochromis niloticus] | 2.99878e-43 |
Transcript
| Transcript ID | pfu_aug2.0_9971.1_06419.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_9971.1_06419.t1 atgtatatatgcattgcattgccaagcatgttttgttatttgcagtatgcagtcaagcgtatcaatttccaaggtcagga gtctgagaggaaggcagccaagaaagaagccgacatcctgtcgcgtgttagtcatgacagtatcctgaattacatagaat catttgaggatgaggaatgtctaaatatagtaacagaatattgcgatggaggagacctggaggtttacatcaagcagaga gaggggaaaaaactgccagaggtccggatttgccactggattcatcaaatagcctcaggattaaagtatctccatgacaa caagatcttacacagagatttgaagacaaagaatgtattcttgatgggagatctgagcctgaaactgggggatcttggaa tagccaagttacttgagttaaatcaaagtaaagcagaaagttttgttggaactccagcatacatgagtccagaactcttc aaacatcttccatacaatcataaa |
|
Protein
| Protein ID | pfu_aug2.0_9971.1_06419.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_9971.1_06419.t1 MYICIALPSMFCYLQYAVKRINFQGQESERKAAKKEADILSRVSHDSILNYIESFEDEECLNIVTEYCDGGDLEVYIKQR EGKKLPEVRICHWIHQIASGLKYLHDNKILHRDLKTKNVFLMGDLSLKLGDLGIAKLLELNQSKAESFVGTPAYMSPELF KHLPYNHK |
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