scaffold10.1 : Genome browser

Genemodel List

Chromosome: – > scaffold10.1

Genemodel ID	Locus	Blast top hit	Blast2GO annotation
pfu_aug2.0_10.1_00001	scaffold10.1:1..7985	succinate dehydrogenase [u...	succinate dehydrogenase
pfu_aug2.0_10.1_00002	scaffold10.1:12991..34835	niemann-Pick C1 protein-li...	niemann-pick c1 protein
pfu_aug2.0_10.1_00003	scaffold10.1:38424..40615		–
pfu_aug2.0_10.1_00004	scaffold10.1:42526..59875	hypothetical protein LOTGID...	–
pfu_aug2.0_10.1_00005	scaffold10.1:73566..76816	sodium/hydrogen exchanger ...	sodium hydrogen exchanger 5-like isoform x2
pfu_aug2.0_10.1_00006	scaffold10.1:77126..86938	sodium/hydrogen exchanger ...	sodium hydrogen exchanger 3- partial
pfu_aug2.0_10.1_00007	scaffold10.1:87116..88632	–	–
pfu_aug2.0_10.1_00008	scaffold10.1:97191..106055	hypothetical protein LOTGID...	–
pfu_aug2.0_10.1_00009	scaffold10.1:106156..128771	uncharacterized protein LO...	–
pfu_aug2.0_10.1_00010	scaffold10.1:129276..132561	–	–
pfu_aug2.0_10.1_00011	scaffold10.1:137013..147335	hypothetical protein LOTGID...	v-type proton atpase subunit d 1
pfu_aug2.0_10.1_00012	scaffold10.1:161147..199618	junctophilin-1-like isofor...	–
pfu_aug2.0_10.1_00013	scaffold10.1:202139..273906	CD109 antigen, partial [Co...	–
pfu_aug2.0_10.1_00014	scaffold10.1:220000..220538	–	–
pfu_aug2.0_10.1_00015	scaffold10.1:274597..286588	E3 ubiquitin-protein ligas...	–
pfu_aug2.0_10.1_00016	scaffold10.1:291319..301174	protein unc-50 homolog iso...	–
pfu_aug2.0_10.1_00017	scaffold10.1:302397..313468	hypothetical protein LOTGID...	–
pfu_aug2.0_10.1_00018	scaffold10.1:323809..329894	–	–
pfu_aug2.0_10.1_00019	scaffold10.1:361212..369123	ATP-binding cassette sub-f...	atp-binding cassette sub-family b member mitochondrial
pfu_aug2.0_10.1_00020	scaffold10.1:369175..372083	ATP-binding cassette sub-f...	atp-binding cassette sub-family b member mitochondrial
pfu_aug2.0_10.1_00021	scaffold10.1:374394..385226	porphobilinogen deaminase ...	porphobilinogen deaminase
pfu_aug2.0_10.1_00022	scaffold10.1:415204..434206	hypothetical protein LOTGID...	–
pfu_aug2.0_10.1_00023	scaffold10.1:463664..474222	porphobilinogen deaminase ...	–
pfu_aug2.0_10.1_00024	scaffold10.1:477184..480807	GJ16472 [Drosophila virilis]	–
pfu_aug2.0_10.1_00025	scaffold10.1:504577..514253	predicted protein [Chlamydo...	–
pfu_aug2.0_10.1_00026	scaffold10.1:526909..539758	hypothetical protein LOTGID...	–
pfu_aug2.0_10.1_00027	scaffold10.1:545491..550248	hypothetical protein LOTGID...	–
pfu_aug2.0_10.1_00028	scaffold10.1:557416..587718	hypothetical protein LOTGID...	protein diaphanous-like isoform x3
pfu_aug2.0_10.1_00029	scaffold10.1:587819..589438	hypothetical protein LOTGID...	neuronal acetylcholine receptor subunit alpha-7-like precursor
pfu_aug2.0_10.1_00030	scaffold10.1:589440..607658	LOW QUALITY PROTEIN: prote...	protein diaphanous isoform x3
pfu_aug2.0_10.1_00031	scaffold10.1:609879..620650	tudor domain-containing pr...	–
pfu_aug2.0_10.1_00032	scaffold10.1:627480..645958	hematological and neurolog...	–
pfu_aug2.0_10.1_00033	scaffold10.1:670829..685633	DNA polymerase beta [Cucul...	dna polymerase beta
pfu_aug2.0_10.1_00034	scaffold10.1:701269..720475	mitochondrial Rho GTPase 1...	mitochondrial rho gtpase 1-a-like isoform x2
pfu_aug2.0_10.1_00035	scaffold10.1:725696..737894	hypothetical protein LOTGID...	–
pfu_aug2.0_10.1_00036	scaffold10.1:742876..755310	hypothetical protein BRAFLD...	tuberin- partial
pfu_aug2.0_10.1_00037	scaffold10.1:755366..759579	tuberin [Microplitis demol...	low quality protein: tuberin
pfu_aug2.0_10.1_00038	scaffold10.1:758529..784942		low quality protein: tuberin-like
pfu_aug2.0_10.1_00039	scaffold10.1:787393..790065	–	–
pfu_aug2.0_10.1_00040	scaffold10.1:793506..801964	–	–
pfu_aug2.0_10.1_00041	scaffold10.1:803568..822115	hypothetical protein LOTGID...	sodium calcium exchanger 3-like
pfu_aug2.0_10.1_00042	scaffold10.1:848086..856269	–	–
pfu_aug2.0_10.1_00043	scaffold10.1:860298..862995	hypothetical protein LOTGID...	–
pfu_aug2.0_10.1_00044	scaffold10.1:866536..883945	–	–

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OIST Marine Genomics Unit since 2008