scaffold3.1 : Genome browser

Genemodel List

Chromosome: – > scaffold3.1

Genemodel ID	Locus	Blast top hit	Blast2GO annotation
pfu_aug2.0_3.1_10020	scaffold3.1:276..3092	39S ribosomal protein L54,...	–
pfu_aug2.0_3.1_10021	scaffold3.1:9207..27615	coiled-coil domain-contain...	–
pfu_aug2.0_3.1_10022	scaffold3.1:28246..32126	uncharacterized protein LOC...	–
pfu_aug2.0_3.1_10023	scaffold3.1:47476..106258	–	inositol -trisphosphate receptor type 3-like
pfu_aug2.0_3.1_10024	scaffold3.1:114476..120445	hypothetical protein LOTGID...	dtdp-glucose 4-6-
pfu_aug2.0_3.1_10025	scaffold3.1:122286..125951	hypothetical protein [Trypa...	–
pfu_aug2.0_3.1_10026	scaffold3.1:141035..151775	–	–
pfu_aug2.0_3.1_10027	scaffold3.1:176024..186228	predicted protein [Nematost...	–
pfu_aug2.0_3.1_10028	scaffold3.1:203910..212827	–	–
pfu_aug2.0_3.1_10029	scaffold3.1:213150..216888	–	–
pfu_aug2.0_3.1_10030	scaffold3.1:237910..243286	GTP-binding protein ypt1-l...	ras-related protein rab-19
pfu_aug2.0_3.1_10031	scaffold3.1:244334..273479	hypothetical protein LOTGID...	–
pfu_aug2.0_3.1_10032	scaffold3.1:273580..281582		–
pfu_aug2.0_3.1_10033	scaffold3.1:286145..328689	rotatin [Anas platyrhynchos]	–
pfu_aug2.0_3.1_10034	scaffold3.1:334780..341390	AAEL004124-PA [Aedes aegypti]	–
pfu_aug2.0_3.1_10035	scaffold3.1:347889..358319	–	–
pfu_aug2.0_3.1_10036	scaffold3.1:390657..439803	inositol hexakisphosphate ...	–
pfu_aug2.0_3.1_10037	scaffold3.1:439850..475734	hypothetical protein LOTGID...	–
pfu_aug2.0_3.1_10038	scaffold3.1:475736..501319	hypothetical protein BRAFLD...	–
pfu_aug2.0_3.1_10039	scaffold3.1:537840..545823		–
pfu_aug2.0_3.1_10040	scaffold3.1:548782..562489	jmjC domain-containing pro...	–
pfu_aug2.0_3.1_10041	scaffold3.1:562952..574330	uncharacterized protein LO...	–
pfu_aug2.0_3.1_10042	scaffold3.1:574562..580311	transmembrane protease ser...	transmembrane protease serine 3 isoform x2
pfu_aug2.0_3.1_10043	scaffold3.1:599597..612241	biogenesis of lysosome-rel...	biogenesis of lysosome-related organelles complex 1 subunit 6
pfu_aug2.0_3.1_10044	scaffold3.1:612342..618169	hypothetical protein LOTGID...	proteasome subunit beta type-4
pfu_aug2.0_3.1_10045	scaffold3.1:620442..622195	cathepsin L [Callorhinchus ...	cathepsin l
pfu_aug2.0_3.1_10046	scaffold3.1:622702..637181	dymeclin-like [Saccoglossu...	–
pfu_aug2.0_3.1_10047	scaffold3.1:637412..646281	hypothetical protein LOTGID...	–
pfu_aug2.0_3.1_10048	scaffold3.1:674169..675041	putative per-hexamer repea...	–
pfu_aug2.0_3.1_10049	scaffold3.1:706882..726926	hypothetical protein LOTGID...	mothers against decapentaplegic homolog 6
pfu_aug2.0_3.1_10050	scaffold3.1:739068..740521	–	–
pfu_aug2.0_3.1_10051	scaffold3.1:742258..746101	–	–
pfu_aug2.0_3.1_10052	scaffold3.1:748632..752346	complement C1q-like protei...	–
pfu_aug2.0_3.1_10053	scaffold3.1:753128..755211	GTPase IMAP family member ...	–
pfu_aug2.0_3.1_10054	scaffold3.1:755615..757801	–	–
pfu_aug2.0_3.1_10055	scaffold3.1:760473..764321	GTPase IMAP family member ...	–
pfu_aug2.0_3.1_10056	scaffold3.1:774322..793135	hypothetical protein LOTGID...	–
pfu_aug2.0_3.1_10057	scaffold3.1:804561..811031	annexin A7 [Strongylocentr...	uncharacterized protein loc764615
pfu_aug2.0_3.1_10058	scaffold3.1:825262..836801	uncharacterized protein LO...	–
pfu_aug2.0_3.1_10059	scaffold3.1:836902..844723	hypothetical protein LOTGID...	rem2- and rab-like small gtpase 1
pfu_aug2.0_3.1_10060	scaffold3.1:844279..872201	hypothetical protein LOTGID...	–
pfu_aug2.0_3.1_10061	scaffold3.1:899562..926710		probable atp-dependent dna helicase hfm1 isoform x1
pfu_aug2.0_3.1_10062	scaffold3.1:926762..934336	hypothetical protein BRAFLD...	–
pfu_aug2.0_3.1_10063	scaffold3.1:934340..954591	protein FAM188B2-like [Apl...	–
pfu_aug2.0_3.1_10064	scaffold3.1:978702..981955	hypothetical protein LOTGID...	–

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OIST Marine Genomics Unit since 2008