scaffold4.1 : Genome browser

Genemodel List

Chromosome: – > scaffold4.1

Genemodel ID	Locus	Blast top hit	Blast2GO annotation
pfu_aug2.0_4.1_13308	scaffold4.1:1..21088	hypothetical protein LOTGID...	–
pfu_aug2.0_4.1_13309	scaffold4.1:44666..68030	–	–
pfu_aug2.0_4.1_13310	scaffold4.1:74004..99465	noninactivating potassium c...	noninactivating potassium channel
pfu_aug2.0_4.1_13311	scaffold4.1:102477..116545		–
pfu_aug2.0_4.1_13312	scaffold4.1:122250..133375	mitochondrial intermembrane...	–
pfu_aug2.0_4.1_13313	scaffold4.1:133876..147263	coiled-coil domain-containi...	–
pfu_aug2.0_4.1_13314	scaffold4.1:152696..166268	hypothetical protein LOTGID...	transcription factor rfx3 isoform x2
pfu_aug2.0_4.1_13315	scaffold4.1:167392..179465	cystinosin-like [Aplysia c...	cystinosin-like protein
pfu_aug2.0_4.1_13316	scaffold4.1:179566..182499	hypothetical protein HELROD...	39s ribosomal protein mitochondrial
pfu_aug2.0_4.1_13317	scaffold4.1:184522..199305		–
pfu_aug2.0_4.1_13318	scaffold4.1:199406..214821	tumor necrosis factor rece...	–
pfu_aug2.0_4.1_13319	scaffold4.1:214824..231015		–
pfu_aug2.0_4.1_13320	scaffold4.1:231116..240239	–	–
pfu_aug2.0_4.1_13321	scaffold4.1:240286..249430	hypothetical protein LOTGID...	–
pfu_aug2.0_4.1_13322	scaffold4.1:249432..276545	hypothetical protein LOTGID...	atp-binding cassette sub-family d member 3 isoform x2
pfu_aug2.0_4.1_13323	scaffold4.1:277427..302285	hypothetical protein LOTGID...	5 -amp-activated protein kinase catalytic subunit alpha-2 isoform x1
pfu_aug2.0_4.1_13324	scaffold4.1:310265..339405	sushi, von Willebrand fact...	–
pfu_aug2.0_4.1_13325	scaffold4.1:340961..347955	kyphoscoliosis peptidase-l...	–
pfu_aug2.0_4.1_13326	scaffold4.1:351692..355410	–	–
pfu_aug2.0_4.1_13327	scaffold4.1:356294..382680	–	–
pfu_aug2.0_4.1_13328	scaffold4.1:386675..392490	–	–
pfu_aug2.0_4.1_13329	scaffold4.1:397845..399640	nanos homolog 2 [Octodon d...	nanos homolog 2
pfu_aug2.0_4.1_13330	scaffold4.1:402168..418150	hypothetical protein HELROD...	–
pfu_aug2.0_4.1_13331	scaffold4.1:425321..428577	mpv17-like protein 2-like ...	mpv17-like protein 2-like
pfu_aug2.0_4.1_13332	scaffold4.1:429572..436110	hypothetical protein LOTGID...	gtp:amp phosphotransferase mitochondrial
pfu_aug2.0_4.1_13333	scaffold4.1:436211..450621	pumilio domain-containing ...	pumilio domain-containing protein kiaa0020 homolog
pfu_aug2.0_4.1_13334	scaffold4.1:451019..483390	ATP-binding cassette sub-f...	atp-binding cassette sub-family a member 1 isoform x2
pfu_aug2.0_4.1_13335	scaffold4.1:489711..526918	ATP-binding cassette sub-f...	atp-binding cassette sub-family a member 1
pfu_aug2.0_4.1_13336	scaffold4.1:531185..534440	–	–
pfu_aug2.0_4.1_13337	scaffold4.1:536641..540311	hypothetical protein LOTGID...	–
pfu_aug2.0_4.1_13338	scaffold4.1:543620..547170	SOSS complex subunit C hom...	–
pfu_aug2.0_4.1_13339	scaffold4.1:547661..560631	uncharacterized protein LO...	–
pfu_aug2.0_4.1_13340	scaffold4.1:563778..567960	DNA primase large subunit ...	dna primase large subunit-like
pfu_aug2.0_4.1_13341	scaffold4.1:568361..591511	probable lysosomal cobalam...	probable lysosomal cobalamin transporter-like
pfu_aug2.0_4.1_13342	scaffold4.1:594461..596785	uncharacterized protein LO...	–
pfu_aug2.0_4.1_13343	scaffold4.1:626191..656403	transcription factor AP-2-...	transcription factor ap-2 beta
pfu_aug2.0_4.1_13344	scaffold4.1:659041..661826	–	–
pfu_aug2.0_4.1_13345	scaffold4.1:662431..691380	uncharacterized protein LO...	–
pfu_aug2.0_4.1_13346	scaffold4.1:696036..697630	–	–
pfu_aug2.0_4.1_13347	scaffold4.1:711503..713332	neurocalcin-delta B [Esox ...	neurocalcin-delta
pfu_aug2.0_4.1_13348	scaffold4.1:719733..732478	hypothetical protein LOTGID...	threo-3-hydroxyaspartate ammonia-lyase-like
pfu_aug2.0_4.1_13349	scaffold4.1:735051..737252	–	–
pfu_aug2.0_4.1_13350	scaffold4.1:755070..756362	–	–
pfu_aug2.0_4.1_13351	scaffold4.1:756488..757782	–	–
pfu_aug2.0_4.1_13352	scaffold4.1:758131..766602	hypothetical protein LOTGID...	–
pfu_aug2.0_4.1_13353	scaffold4.1:767478..776982	L-threonine 3-dehydrogenas...	l-threonine 3- mitochondrial- partial
pfu_aug2.0_4.1_13354	scaffold4.1:785324..786812	hypothetical protein BRAFLD...	protocatechuate -dioxygenase subunit beta
pfu_aug2.0_4.1_13355	scaffold4.1:790472..791592	hypothetical protein BRAFLD...	protocatechuate -dioxygenase subunit beta
pfu_aug2.0_4.1_13356	scaffold4.1:796943..809842	probable rRNA-processing p...	–
pfu_aug2.0_4.1_13357	scaffold4.1:810102..814802	hypothetical protein LOTGID...	–
pfu_aug2.0_4.1_13358	scaffold4.1:826783..841222	hypothetical protein LOTGID...	fizzy-related protein homolog isoform x2
pfu_aug2.0_4.1_13359	scaffold4.1:855103..871557	hypothetical protein LOTGID...	–
pfu_aug2.0_4.1_13360	scaffold4.1:871684..875502	alpha-1,3/1,6-mannosyltran...	alpha- -mannosyltransferase alg2-like
pfu_aug2.0_4.1_13361	scaffold4.1:877126..930514	hypothetical protein HELROD...	catalytic subunit of protein kinase a
pfu_aug2.0_4.1_13362	scaffold4.1:932312..941475	LOW QUALITY PROTEIN: ubiqu...	ubiquitin carboxyl-terminal hydrolase 24-like isoform x3
pfu_aug2.0_4.1_13363	scaffold4.1:942032..974245	LOW QUALITY PROTEIN: ubiqu...	ubiquitin carboxyl-terminal hydrolase 24

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OIST Marine Genomics Unit since 2008