scaffold40.1 : Genome browser

Genemodel List

Chromosome: – > scaffold40.1

Genemodel ID	Locus	Blast top hit	Blast2GO annotation
pfu_aug2.0_40.1_00098	scaffold40.1:40266..69582		matrix metalloproteinase-25
pfu_aug2.0_40.1_00099	scaffold40.1:73665..75215	–	–
pfu_aug2.0_40.1_00100	scaffold40.1:77716..93225	short-chain specific acyl-...	short-chain specific acyl- mitochondrial
pfu_aug2.0_40.1_00101	scaffold40.1:157357..193115	LIM/homeobox protein Lhx5-...	lim homeobox protein lhx5
pfu_aug2.0_40.1_00102	scaffold40.1:228249..240065	28S ribosomal protein S23,...	–
pfu_aug2.0_40.1_00103	scaffold40.1:242403..247405	–	–
pfu_aug2.0_40.1_00104	scaffold40.1:252026..264420	uncharacterized protein LO...	–
pfu_aug2.0_40.1_00105	scaffold40.1:311502..351408	hypothetical protein BRAFLD...	hypothetical protein BRAFLDRAFT_67435 [Branchiostoma floridae]
pfu_aug2.0_40.1_00106	scaffold40.1:373019..390172	predicted protein [Nematost...	–
pfu_aug2.0_40.1_00107	scaffold40.1:394460..424748	uncharacterized protein LO...	–
pfu_aug2.0_40.1_00108	scaffold40.1:428058..429148	hypothetical protein LOTGID...	–
pfu_aug2.0_40.1_00109	scaffold40.1:429210..434848	hypothetical protein LOTGID...	uncharacterized protein loc105183358
pfu_aug2.0_40.1_00110	scaffold40.1:439312..445988	hypothetical protein LOTGID...	–
pfu_aug2.0_40.1_00111	scaffold40.1:458280..463008	probable ATP-dependent RNA...	probable atp-dependent rna helicase dhx35
pfu_aug2.0_40.1_00112	scaffold40.1:468016..535599	dynein heavy chain 5, axon...	dynein heavy chain axonemal-like
pfu_aug2.0_40.1_00113	scaffold40.1:538420..550780		–
pfu_aug2.0_40.1_00114	scaffold40.1:552270..565710	fibrinogen-like protein A ...	–
pfu_aug2.0_40.1_00115	scaffold40.1:572440..576442	ficolin-1 [Chrysochloris a...	–
pfu_aug2.0_40.1_00116	scaffold40.1:582720..586143	lysosomal alpha-mannosidas...	lysosomal alpha-mannosidase-like
pfu_aug2.0_40.1_00117	scaffold40.1:588097..596199	coiled-coil domain-contain...	–
pfu_aug2.0_40.1_00118	scaffold40.1:600330..606492	hypothetical protein LOTGID...	adenine phosphoribosyltransferase
pfu_aug2.0_40.1_00119	scaffold40.1:610956..617459	NEDD8 [Acyrthosiphon pisum]	nedd8

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OIST Marine Genomics Unit since 2008