Genome browser
OIST Marine Genomics Unit since 2008
Transcription Factors: Total 85 genes are annotated
Gene model
Gene name
Description
Blast top hit
Blast2GO annotation
Scaffold
pfu_aug1.0_5662.1_23858
fork head box protein F-like
Reciprocal BLASTP best hit ...
gi|274133304|emb|CBI70345.1|
forkhead box F protein [Pat...
–
scaffold5662.1
pfu_aug1.0_9684.1_60643
Pfu-48 related 1-2
Best hit to NP_835455 pancr...
gi|72104716|ref|XP_787068.1|
pancreas transcription fac...
–
scaffold9684.1
pfu_aug1.0_9632.1_38937
Pfu-48 related 2
Best hit to NP_835455 pancr...
gi|242020670|ref|XP_0024307...
hypothetical protein Phum_P...
–
scaffold9632.1
pfu_aug1.0_5392.1_45198
Pfu-ACSa1
Best hit to NP_004307 achae...
–
–
–
scaffold5392.1
pfu_aug1.0_5392.1_45194
Pfu-ACSa2
Best hit to NP_004307 achae...
gi|439530|gb|AAA03722.1|
transcriptional regulator [...
–
scaffold5392.1
pfu_aug1.0_8765.1_24472
Pfu-ACSb
Best hit to Q7RTU5 Achaete-...
–
–
–
scaffold8765.1
pfu_aug1.0_3633.1_52045
Pfu-AHR
Best hit to EAW50997 hCG198...
gi|7839662|gb|AAF70378.1|AF...
aryl hydrocarbon receptor-l...
–
scaffold3633.1
pfu_aug1.0_3633.1_52046
Pfu-AHR-related
Best hit to ACL80140 aryl h...
gi|227908937|gb|ACL80140.3|
aryl hydrocarbon receptor [...
–
scaffold3633.1
pfu_aug1.0_1868.1_37159
Pfu-amber
Best hit to Adi-amber by a ...
gi|156370137|ref|XP_0016283...
predicted protein [Nematost...
–
scaffold1868.1
pfu_aug1.0_4162.1_66900
Pfu-AP4
Best hit to CAA40683 transc...
gi|354488493|ref|XP_0035064...
transcription factor AP-4 ...
–
scaffold4162.1
pfu_aug1.0_39991.1_05104
Pfu-ARNT
Best hit to AAH60838 ARNT p...
gi|95007805|dbj|BAE94239.1|
aryl hydrocarbone receptor ...
–
scaffold39991.1
pfu_aug1.0_994.1_43872
Pfu-atonal
Best hit to AAH69578 ATOH1 ...
gi|91078386|ref|XP_974297.1|
basic helix-loop-helix tra...
–
scaffold994.1
pfu_aug1.0_57367.1_48874
Pfu-Beta3
Best hit to BAG57349 basic ...
gi|31419015|gb|AAH53312.1|
Basic helix-loop-helix fami...
–
scaffold57367.1
pfu_aug1.0_18654.1_47238
Pfu-bmal
Best hit to EAW68508 aryl h...
gi|3211720|gb|AAC21449.1|
TIC [Rattus norvegicus]
–
scaffold18654.1
pfu_aug1.0_13942.1_10662
Pfu-clock-related
Best hit to AEJ87226 clock ...
gi|157132927|ref|XP_0016627...
AAEL012562-PA [Aedes aegypti]
–
scaffold13942.1
pfu_aug1.0_1362.1_15443
Pfu-clockwork orange
Best hit to BAG64825 unname...
gi|110761895|ref|XP_0011219...
hairy/enhancer-of-split re...
–
scaffold1362.1
pfu_aug1.0_1877.1_44167
Pfu-COE-related
Best hit to transcription f...
gi|312166114|gb|ADQ39028.1|
transcription factor COE [H...
–
scaffold1877.1
pfu_aug1.0_6538.1_09374
Pfu-cranky
Best hit to NP_849195 neuro...
gi|157118010|ref|XP_0016589...
AAEL008129-PA [Aedes aegypti]
–
scaffold6538.1
pfu_aug1.0_7021.1_02366
Pfu-Delilah
Best hit to EAX04750 heart ...
gi|225711932|gb|ACO11812.1|
Neurogenic differentiation ...
–
scaffold7021.1
pfu_aug1.0_37.1_36246
Pfu-E12/E47
Best hit to AAA60310 SEF2-1...
gi|327277906|ref|XP_0032237...
–
scaffold37.1
pfu_aug1.0_83.1_50613
Pfu-Hairy_orange domain containing 1
Best hit to CAG03204 unname...
–
–
–
scaffold83.1
pfu_aug1.0_25206.1_11676
Pfu-Hairy_orange domain containing 3
Best hit to NP_001161564 he...
gi|269785273|ref|NP_0011615...
hey-like transcription fact...
–
scaffold25206.1
pfu_aug1.0_2402.1_66308
Pfu-Hairy_orange domain containing 4
Best hit to XP_002738771 PR...
–
–
–
scaffold2402.1
pfu_aug1.0_91.1_65233
Pfu-Hand
Best hit to AAD13185 basic ...
gi|154147704|ref|NP_0010936...
heart- and neural crest der...
–
scaffold91.1
pfu_aug1.0_30743.1_26538
Pfu-HES-like1
The predicted protein showe...
–
–
–
scaffold30743.1
pfu_aug1.0_24692.1_26195
Pfu-HES-like2
Best hit to EAW78058 hairy ...
gi|118343727|ref|NP_0010716...
transcription factor protei...
–
scaffold24692.1
pfu_aug1.0_105.1_29100
Pfu-HES1
Best hit to NP_066993 trans...
–
–
–
scaffold105.1
pfu_aug1.0_10927.1_53624
Pfu-HES2
Best hit to EAW78058 hairy ...
–
–
–
scaffold10927.1
pfu_aug1.0_11631.1_24932
Pfu-HES3
Best hit to EAW78058 hairy ...
–
–
–
scaffold11631.1
pfu_aug1.0_164384.1_28487
Pfu-HES4
Best hit to EAW78058 hairy ...
gi|47225756|emb|CAG08099.1|
unnamed protein product, pa...
–
scaffold164384.1
pfu_aug1.0_4271.1_01686
Pfu-HES5
Best hit to EAW78058 hairy ...
gi|54292102|ref|NP_00100584...
transcription factor HES-1 ...
–
scaffold4271.1
pfu_aug1.0_83486.1_63907
Pfu-HES6
Best hit to NP_066993 trans...
–
–
–
scaffold83486.1
pfu_aug1.0_12059.1_24977
Pfu-HEY
Best hit to AAL06278 basic ...
gi|259013448|ref|NP_0011584...
hairy/enhancer-of-split rel...
–
scaffold12059.1
pfu_aug1.0_20632.1_25878
Pfu-Hif-related1
Best hit to BAG65259 unname...
gi|331687645|gb|AED87588.1|
hypoxia-inducible factor 1 ...
–
scaffold20632.1
pfu_aug1.0_85306.1_49342
Pfu-Hif-related2
Best hit to BAG65259 unname...
–
–
–
scaffold85306.1
pfu_aug1.0_4165.1_23515
Pfu-Hif/Sim/Trh-related
Best hit to AAY14704 endoth...
–
–
–
scaffold4165.1
pfu_aug1.0_7320.1_45633
Pfu-ID
Best hit to NP_002157 DNA-b...
gi|351712276|gb|EHB15195.1|
–
scaffold7320.1
pfu_aug1.0_15482.1_61501
Pfu-Mad
Best hit to NP_569157 max-i...
–
–
–
scaffold15482.1
pfu_aug1.0_9915.1_31847
Pfu-Max
Best hit to AAQ57210 MAX pr...
gi|47230248|emb|CAG10662.1|
unnamed protein product, pa...
–
scaffold9915.1
pfu_aug1.0_522.1_22207
Pfu-MIST
Best hit to NP_803238 class...
gi|328777481|ref|XP_0032493...
class A basic helix-loop-h...
–
scaffold522.1
pfu_aug1.0_16196.1_25497
Pfu-MITF-related1
Best hit to EAW50714 enhanc...
–
–
–
scaffold16196.1
pfu_aug1.0_11839.1_68415
Pfu-MITF-related2
Best hit to CAI22453 transc...
gi|241715136|ref|XP_0024121...
helix-loop-helix transcript...
–
scaffold11839.1
pfu_aug1.0_15766.1_61549
Pfu-MITF-related3
Best hit to CAI22454 transc...
–
–
–
scaffold15766.1
pfu_aug1.0_28284.1_40713
Pfu-Mlx-related1
Best hit to AAG34121 MondoA...
–
–
–
scaffold28284.1
pfu_aug1.0_78042.1_56561
Pfu-Mlx-related2
Best hit to AAG34121 MondoA...
gi|292614351|ref|XP_0013385...
–
scaffold78042.1
pfu_aug1.0_34585.1_70133
Pfu-Mlx-related3
Best hit to AAH28309 MLXIP ...
gi|189237334|ref|XP_973749.2|
–
scaffold34585.1
pfu_aug1.0_15123.1_61451
Pfu-Mnt
Best hit to NP_064706 max-b...
gi|241594851|ref|XP_0024043...
max binding protein mnt, pu...
–
scaffold15123.1
pfu_aug1.0_4931.1_30820
Pfu-Myc
Best hit to BAG61453 unname...
gi|259013287|ref|NP_0011584...
myc proto-oncogene protein ...
–
scaffold4931.1
pfu_aug1.0_15323.1_39685
Pfu-MyoD
Best hit to NP_005584 myoge...
gi|242017454|ref|XP_0024292...
myogenic factor, putative [...
–
scaffold15323.1
pfu_aug1.0_12989.1_10543
Pfu-MyoRb
Best hit to Q7RTU0 RecName:...
gi|291240317|ref|XP_0027400...
transcription factor 23-li...
–
scaffold12989.1
pfu_aug1.0_88481.1_42216
Pfu-NeuroD
Best hit to BAA36519 BETA2 ...
gi|189094802|emb|CAQ57533.1|
neurogenic differentiation ...
–
scaffold88481.1
pfu_aug1.0_1868.1_37158
Pfu-neurogenin
Best hit to AAB37575 bHLH p...
gi|189094806|emb|CAQ57535.1|
neurogenin [Platynereis dum...
–
scaffold1868.1
pfu_aug1.0_7893.1_38660
Pfu-NSCL
Best hit to NP_005589 helix...
gi|345491490|ref|XP_0016058...
–
scaffold7893.1
pfu_aug1.0_61157.1_63590
Pfu-Oligo-like
Best hit to AAH34681 OLIG2 ...
gi|348517523|ref|XP_0034462...
oligodendrocyte transcript...
–
scaffold61157.1
pfu_aug1.0_6715.1_60089
Pfu-Oligo-related
Best hit to NP_005797 oligo...
–
–
–
scaffold6715.1
pfu_aug1.0_4032.1_44843
Pfu-orphan-HLH-a
Best hit to NP_835455 pancr...
–
–
–
scaffold4032.1
pfu_aug1.0_91850.1_71387
Pfu-orphan-HLH-a-b
Best hit to NP_835455 pancr...
–
–
–
scaffold91850.1
pfu_aug1.0_2172.1_58809
Pfu-orphan-HLH-b
This annotation is based on...
–
–
–
scaffold2172.1
pfu_aug1.0_2344.1_15792
Pfu-orphan-HLH-c
Best hit to ADM47440 methop...
–
–
–
scaffold2344.1
pfu_aug1.0_1846.1_58666
Pfu-orphan-HLH-d
Best hit to BAA19936 BMAL1c...
gi|242020804|ref|XP_0024308...
hypoxia-inducible factor 1 ...
–
scaffold1846.1
pfu_aug1.0_3633.1_52045
Pfu-orphan-HLH-e
scaffold 2589.1; 3681...385...
gi|7839662|gb|AAF70378.1|AF...
aryl hydrocarbon receptor-l...
–
scaffold3633.1
pfu_aug1.0_23332.1_40414
Pfu-orphan-HLH-f
scaffold 37476.1; 13170...1...
gi|301616943|ref|XP_0029379...
–
scaffold23332.1
pfu_aug1.0_24175.1_69619
Pfu-orphan-HLH-h
Best hit to BAB83913 putati...
–
–
–
scaffold24175.1
pfu_aug1.0_35838.1_62836
Pfu-orphan-HLH-h-b
Best hit to BAB83913 putati...
–
–
–
scaffold35838.1
pfu_aug1.0_1629.1_00772
Pfu-orphan-HLH-j
Best hit to EAX04750 heart ...
–
–
–
scaffold1629.1
pfu_aug1.0_2718.1_23060
Pfu-orphan-HLH-k-a
Best hit to NP_064706 max-b...
–
–
–
scaffold2718.1
pfu_aug1.0_53878.1_34549
Pfu-orphan-HLH-k-b
The predicted amino acid se...
–
–
–
scaffold53878.1
pfu_aug1.0_23332.1_40414
Pfu-Paraxis
Best hit to AAH67836 TCF15 ...
gi|301616943|ref|XP_0029379...
–
scaffold23332.1
pfu_aug1.0_3465.1_01465
Pfu-pearl
Best hit to Adi-pearl with ...
–
–
–
scaffold3465.1
pfu_aug1.0_9684.1_60643
Pfu-PTFa-like
scaf11169.1; 10131...10364 ...
gi|72104716|ref|XP_787068.1|
pancreas transcription fac...
–
scaffold9684.1
pfu_aug1.0_24801.1_19033
Pfu-PTFa1
Best hit to AAI01137 Fer3-l...
gi|242007238|ref|XP_0024244...
protein lin-32, putative [P...
–
scaffold24801.1
pfu_aug1.0_3558.1_08659
Pfu-PTFa2
Best hit to NP_690862 fer3-...
gi|291226431|ref|XP_0027331...
myoblast determination pro...
–
scaffold3558.1
pfu_aug1.0_108.1_50631
Pfu-SCL
Best hit to CAA36246 tal1 [...
gi|14906481|gb|AAK72692.1|
–
scaffold108.1
pfu_aug1.0_114087.1_21027
Pfu-Sim
Best hit to BAA07906 Sim pr...
gi|326670907|ref|XP_0031993...
–
scaffold114087.1
pfu_aug1.0_914.1_29482
Pfu-SRC
Best hit to EAW75696 nuclea...
gi|241244650|ref|XP_0024023...
nuclear receptor coactivato...
–
scaffold914.1
pfu_aug1.0_18185.1_32891
Pfu-SREBP
Best hit to BAG61752 unname...
gi|260832924|ref|XP_0026114...
hypothetical protein BRAFLD...
–
scaffold18185.1
pfu_aug1.0_45771.1_12598
Pfu-SREBP-related2
Best hit to AAC50051 SREBP-...
–
–
–
scaffold45771.1
pfu_aug1.0_505084.1_65113
Pfu-SREBP-related3
Best hit to AAH26962 Unknow...
–
–
–
scaffold505084.1
pfu_aug1.0_8327.1_09745
Pfu-TF4
Best hit to NP_937847 max-l...
gi|260816515|ref|XP_0026030...
hypothetical protein BRAFLD...
–
scaffold8327.1
pfu_aug1.0_3498.1_37619
Pfu-Trh-related1
Best hit to EHJ73300 trache...
gi|328712552|ref|XP_0019495...
–
scaffold3498.1
pfu_aug1.0_31798.1_04792
Pfu-Trh-related2
Best hit to XP_002434755 ne...
gi|242000224|ref|XP_0024347...
neuronal pas domain protein...
–
scaffold31798.1
pfu_aug1.0_2589.1_44421
Pfu-Trh-related3
Best hit to NP_001158221 ne...
–
–
–
scaffold2589.1
pfu_aug1.0_248.1_14935
Pfu-twist1
Best hit to NP_476527 twist...
gi|327279552|ref|XP_0032245...
–
scaffold248.1
pfu_aug1.0_4112.1_52186
Pfu-twist2
Best hit to CAA67664 B-HLH ...
gi|58585216|ref|NP_00101163...
twist [Apis mellifera]
–
scaffold4112.1
pfu_aug1.0_19193.1_54552
Pfu-USF
Best hit to AAB24368 upstre...
gi|1022700|gb|AAA79690.1|
USF [Lytechinus variegatus]
–
scaffold19193.1
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