publication
For those who utilize our genome and transcriptome data, please cite:
Shoguchi, E., Beedessee, G., Tada, I., Hisata, K., Kawashima, T., Takeuchi, T., Arakaki, N., Fujie, M., Koyanagi, R., Roy, M.C., Kawachi, M., Hidaka, M., Satoh, N., Shinzato, C.
Two divergent Symbiodinium genomes reveal conservation of a gene cluster for sunscreen biosynthesis and recently lost genes
BMC Genomics. 2018;19:458. doi:10.1186/s12864-018-4857-9. (2018)
Two divergent Symbiodinium genomes reveal conservation of a gene cluster for sunscreen biosynthesis and recently lost genes
BMC Genomics. 2018;19:458. doi:10.1186/s12864-018-4857-9. (2018)
Assembly v1.0 (2014)
| symA3_37.fasta.gz | Genome Assembly ver 1.0, (compressed with gzip) |
| syma_aug_37.aa.gz | Predicted Proteins for Genome Assembly ver 1.0, (compressed with gzip) |
| syma_aug_37.fasta.gz | Predicted Trascripts for Genome Assembly ver 1.0, (compressed with gzip) |
| syma_transcriptome_37.fasta.gz | Assembled Transcriptome v1.0 with Trinity assembler, (compressed with gzip) |
| 37_symb.gff.gz | Predicted Genes for Genome Assembly ver 1.0, (compressed with gzip) |
HPLC data (Shoguchi et al., 2018)
| SymbiodiniumA3-H2O9.txt.zip |
MS data (Shoguchi et al., 2018)
| Symbiodinium-A3-Retention8min1.mzXML.zip |