Gene
Gene Model ID | pfu_aug1.0_1195.1_58404 |
---|---|
Locus | scaffold1195.1 : 17076 ... 26239 : + |
To GenomeBrowser | scaffold1195.1:17076..26239 |
Genes list of scaffold | scaffold1195.1 |
Synonym | NA |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_1195.1_58404.t1 | 1 | 1 | UMP1 | 59 | 120 | 3.1e-14 | 53.0 | 2.4e-18 | 3.6e-14 | 52.8 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_1195.1_58404.t1 | gi|156397211|ref|XP_001637785.1| | predicted protein [Nematostella vectensis] | 3.0e-14 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 4 |
egg-4cell | 1 |
8-16cell | 1 |
trochophore | 1 |
>Adult tissues | |
adductorMuscle | 1 |
maleGonad | 2 |
mantle | 2 |
mantleEdge | 1 |
pearlSac | 1 |
Transcript
Transcript ID | pfu_aug1.0_1195.1_58404.t1 |
---|---|
Definition | - |
>pfu_aug1.0_1195.1_58404.t1 atgttaacgtacgaaaacgaacattggatcttaaaatcggaaactcagcgttgcatttacgaatgcagctgcacatgtgc attcaaggaaaagaacattccttatccctctgtgcgacctcagccttctggctcacaggaagtcaaggtcaaggaaggtc catatggtgtcccagacgttatgcttaatggtcttcacagcagcagagagagtacatcagctgtccacccattagagcac tccgaaaaacattggaatgaaaacaaatgtcagatggactttgccatgttaagaaagatggaggggatccatatgccact tagattacaaatggagaacaatatctcactaaaagtaagtcttcccacttag |
Protein
Protein ID | pfu_aug1.0_1195.1_58404.t1 |
---|---|
Definition | - |
>pfu_aug1.0_1195.1_58404.t1 MLTYENEHWILKSETQRCIYECSCTCAFKEKNIPYPSVRPQPSGSQEVKVKEGPYGVPDVMLNGLHSSRESTSAVHPLEH SEKHWNENKCQMDFAMLRKMEGIHMPLRLQMENNISLKVSLPT |