Gene
Gene Model ID | pfu_aug1.0_1201.1_07834 |
---|---|
Locus | scaffold1201.1 : 38656 ... 69543 : + |
To GenomeBrowser | scaffold1201.1:38656..69543 |
Genes list of scaffold | scaffold1201.1 |
Synonym | pfu_aug2.0_1956.1_21870 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_1201.1_07834.t1 | 1 | 1 | CBFB_NFYA | 181 | 237 | 4.5e-27 | 94.3 | 4.6e-31 | 6.8e-27 | 93.7 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_1201.1_07834.t1 | gi|348514682|ref|XP_003444869.1| | 7.0e-25 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
egg-4cell | 1 |
8-16cell | 1 |
egg-Dshape | 2 |
trochophore | 1 |
>Adult tissues | |
Dshape | 1 |
maleGonad | 1 |
mantle | 1 |
Transcript
Transcript ID | pfu_aug1.0_1201.1_07834.t1 |
---|---|
Definition | - |
>pfu_aug1.0_1201.1_07834.t1 atggctgataatgatcagaatacttttacggtctttgacacggaaactcagcagccagtcaccgtgaccgtaacaccaaa tgacgagggccacagtgtccatcaaggtgtacaatacataacacctgatggggtccctatccatcatattacacagcctg gaggtgaagttgttcaggtgtcagatgcttctttattgacaaacacgtcattctcaagcgtgagtcaaggggcacagaac agcagtgtgccagtgatggtgtctgctggttcatctccggcacagagtgtggtgcagcaacaaggcaacatgattgtaca acagcaacctgcagcaccgcaagtggcaaacacaacatcaatgacgccagcagtgggtgttccacagatgttgtttctga accaggtcactgtgaatggtcagacgtcctttgttttggtcgatgccaacaataaacctgtacaactgccgcaaggtatc caagttattaacttgccaacacaagcagctaatcaacaaatatcaacaggtgacacaggagaggaacctttatatgtcaa tgctaagcaataccatagaattctgaagagacggcaagctagagctaaacttgaggctctcggaaaaatacccaaagaaa gacagaaatacctgtatgaatctagacatcgtcatgcaatgaacaggcagcggggatctgggggtgtgtttgttagggga ggaaaggaagaaatgggagatgacgtagtgacggaaagtcgcaatggcagcataagtgtaaatgataccaagccggaccc ccctcccagaacacctgtacccatcgccatagcaccaagtactacgacatcccagaattcattttccgtttcgcagttga gcggcaatcactcttccacaaccctggagctccccctaggtcttgcccagcagatgggcgtgtccctggcacagcagata tcctctggacagatcaccatagctcataatcctggcattagtaacacaaatatcaccactaatggcacggccatagaaaa tgctacaggggacattctaaataatttgcaaacatag |
Protein
Protein ID | pfu_aug1.0_1201.1_07834.t1 |
---|---|
Definition | - |
>pfu_aug1.0_1201.1_07834.t1 MADNDQNTFTVFDTETQQPVTVTVTPNDEGHSVHQGVQYITPDGVPIHHITQPGGEVVQVSDASLLTNTSFSSVSQGAQN SSVPVMVSAGSSPAQSVVQQQGNMIVQQQPAAPQVANTTSMTPAVGVPQMLFLNQVTVNGQTSFVLVDANNKPVQLPQGI QVINLPTQAANQQISTGDTGEEPLYVNAKQYHRILKRRQARAKLEALGKIPKERQKYLYESRHRHAMNRQRGSGGVFVRG GKEEMGDDVVTESRNGSISVNDTKPDPPPRTPVPIAIAPSTTTSQNSFSVSQLSGNHSSTTLELPLGLAQQMGVSLAQQI SSGQITIAHNPGISNTNITTNGTAIENATGDILNNLQT |