Gene
Gene Model ID | pfu_aug1.0_1201.1_07841 |
---|---|
Locus | scaffold1201.1 : 190225 ... 194561 : - |
To GenomeBrowser | scaffold1201.1:190225..194561 |
Genes list of scaffold | scaffold1201.1 |
Synonym | pfu_aug2.0_3444.1_15792 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_1201.1_07841.t1 | 1 | 1 | Rhodanese | 179 | 280 | 9.4e-14 | 51.7 | 1.1e-17 | 1.6e-13 | 50.9 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_1201.1_07841.t1 | gi|91094429|ref|XP_969518.1| | PREDICTED: M-phase inducer phosphatase [Tribolium castaneum] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
egg-4cell | 1 |
8-16cell | 1 |
egg-Dshape | 1 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_1201.1_07841.t1 |
---|---|
Definition | - |
>pfu_aug1.0_1201.1_07841.t1 tcagcgttggatatcgaataaacatattaacaagaatgaataccatagaatacaaaggccttaccagttcacctgtagct gacaagatcatggagacactattttacgaagaggacacggattacctatctccggtgatgacaccgaaaacagagtgtaa actttcaacacttttgaaaaacgtggctatcacatcagaatctgtgggtcttaaaaaagtgaagagtgcgaagaaacaac tttttggtttgaaacgtcagcataacgaattggaggagagcagatctgtgaaacgcagatgcagtggcgacctctatgac agaaagttgcaaacggatgtcgggtgtgcagagaacaaacaatcgtctgtgttgaaaccggccatcaacgagcactcttt taacgaagacatgatcggtgacagaagccgcccgtatcgtctacccaccgtgacaggaaaacacaaggatctcaaaagca tcactcctaaaacgttggttgatgtcatgtctgggcggtatgctcacgtgatcagtagctacagaattatagattgtaga tatccatatgaattcaaaggaggtcatataaagggagcagaaaacattttcacggaggaaggaatcatggcattgcttaa cgaacactcagaagactccagttcatcacgtgacaaaagtgacatcattattttccactgtgaattctcatcagaacgag gccctaaaaagtgcagattccttcggaataaagatagacaacttaaccaggagaattaccctcgcctgaattttccagag ttgtacatcttggatcaaggctataaacaattctacgcagaattcaaggaggaatgctctccgatgagttacaaacccat gctacacgcagaccacaatgacgatttgcgatacttccggcagaagtctaaaacctggagcggaagagaaaaacgtacat tttccagacacagtattagattttaa |
Protein
Protein ID | pfu_aug1.0_1201.1_07841.t1 |
---|---|
Definition | - |
>pfu_aug1.0_1201.1_07841.t1 SVGYRINILTRMNTIEYKGLTSSPVADKIMETLFYEEDTDYLSPVMTPKTECKLSTLLKNVAITSESVGLKKVKSAKKQL FGLKRQHNELEESRSVKRRCSGDLYDRKLQTDVGCAENKQSSVLKPAINEHSFNEDMIGDRSRPYRLPTVTGKHKDLKSI TPKTLVDVMSGRYAHVISSYRIIDCRYPYEFKGGHIKGAENIFTEEGIMALLNEHSEDSSSSRDKSDIIIFHCEFSSERG PKKCRFLRNKDRQLNQENYPRLNFPELYILDQGYKQFYAEFKEECSPMSYKPMLHADHNDDLRYFRQKSKTWSGREKRTF SRHSIRF |