Gene
Gene Model ID | pfu_aug1.0_12166.1_61009 |
---|---|
Locus | scaffold12166.1 : 39369 ... 42675 : - |
To GenomeBrowser | scaffold12166.1:39369..42675 |
Genes list of scaffold | scaffold12166.1 |
Synonym | pfu_aug2.0_471.1_04228 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_12166.1_61009.t1 | 1 | 1 | RVT_1 | 18 | 223 | 4.6e-34 | 117.6 | 3.9e-38 | 5.8e-34 | 117.3 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues | |
maleGonad | 1 |
Transcript
Transcript ID | pfu_aug1.0_12166.1_61009.t1 |
---|---|
Definition | - |
>pfu_aug1.0_12166.1_61009.t1 atggagcatatcataacatcaacaataatgcgacatggagaaaagcacggtatcctgtatgaattgcagcatggattcag aaaaggcaggtcttgtgaaacacaacttattgaattcattgatgaccttgccaacaaccttgacaaaggccagcaaacag atgtcctcatcatggactttgccaaagccttcgacaaagtaaatcacagcctcctcgtccataagcttaccacgtttggt atatgcggttacataaaccagtggatatcaaagtggataagtcaaaggacacaaacagtggtgcttgacggtcagaggtc aaggtcagttcctgtagaatctggggttccacaaggctcagttcttggaccgagtctgtttctctactacatcaatgacc ttcaagagaaactgacatccacagtgaggttatttgctgatgacaccatagcatacctcacaataacatcaaaagagagt gggaaaatacttcagtcagatcttgacaagcttgctgaatgggagaagctgtggtgcatgaaattccatccggacaagtg caatgtcatcaaggtcacacacagaaagaagcccataaacaccacctaccatctgcatgggcataccctagaggaagtaa caacagctaaatatctaggagtgaacatacagaacaacctaaagtgggacacccatattaatcaaatcacagacaaagcg aacaaaaccctaggcttcctcaggagaaatctaaaggtatcctcaaccaagatcaagactcaggcctacaacgggggaag gaattatgctctggacaaggttttactaatgattcctattgtgaccttgatccttgacctatga |
Protein
Protein ID | pfu_aug1.0_12166.1_61009.t1 |
---|---|
Definition | - |
>pfu_aug1.0_12166.1_61009.t1 MEHIITSTIMRHGEKHGILYELQHGFRKGRSCETQLIEFIDDLANNLDKGQQTDVLIMDFAKAFDKVNHSLLVHKLTTFG ICGYINQWISKWISQRTQTVVLDGQRSRSVPVESGVPQGSVLGPSLFLYYINDLQEKLTSTVRLFADDTIAYLTITSKES GKILQSDLDKLAEWEKLWCMKFHPDKCNVIKVTHRKKPINTTYHLHGHTLEEVTTAKYLGVNIQNNLKWDTHINQITDKA NKTLGFLRRNLKVSSTKIKTQAYNGGRNYALDKVLLMIPIVTLILDL |