Gene
Gene Model ID | pfu_aug1.0_13074.1_39435 |
---|---|
Locus | scaffold13074.1 : 1 ... 17705 : - |
To GenomeBrowser | scaffold13074.1:1..17705 |
Genes list of scaffold | scaffold13074.1 |
Synonym | pfu_aug2.0_515.1_17516 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_13074.1_39435.t1 | 2 | 1 | RNase_T | 29 | 126 | 4.7e-13 | 49.7 | 2.2e-16 | 1.6e-12 | 47.9 |
pfu_aug1.0_13074.1_39435.t1 | 2 | 2 | RNase_T | 176 | 206 | 4.7e-13 | 49.7 | 0.27 | 2000.0 | -1.1 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_13074.1_39435.t1 | gi|242021728|ref|XP_002431295.1| | exonuclease nef-sp, putative [Pediculus humanus corporis] | 8.0e-38 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 2 |
>Adult tissues | |
maleGonad | 1 |
Transcript
Transcript ID | pfu_aug1.0_13074.1_39435.t1 |
---|---|
Definition | - |
>pfu_aug1.0_13074.1_39435.t1 atgggcatttccaaagattcatacaagaacttcaaatacaccaataagaaatactctactgtcaccagccaaagccccat gtttggacttgactgtgaaatgtgtatgactactgcaaaacgaccagaactaacttgggtgtcagtgataaatgaaaacc tggaaactgtctataatacattagtgaagccatacaacaaggtcaccaactatttgacaaggtggagtgggataaccaaa gccttgttggatccggtgaacaaacgtttagaagaggtacagagagacttacagaagttgctacccccagacgccatact gtgtggacaatccttacagtgtgatctcctagctctacaggtcaatcacactttgatgacttttgtatgtgaaatcttta acaagccattacgtccagattccttttcaactgctttagtagcggacaaagaagtagtcgattattttgggaggaatgac atagcttccatggaatcagactctgataagacaacaaaatcgctaacaaaatcctacgtacagtatcatgactttgtcta cagttccttcccatcattcaaacagtgcaatacaaaagaaatgaccgaagaaaacaagaagaaacttctttggaagatga gcaggaaggttgtgaaggtattaaaacatgtgagacctaactgtatagtgatggtagtgttaccaggaaggactgatagt gaaggggatcataatgctgtatgtctatgcaaagttacataa |
Protein
Protein ID | pfu_aug1.0_13074.1_39435.t1 |
---|---|
Definition | - |
>pfu_aug1.0_13074.1_39435.t1 MGISKDSYKNFKYTNKKYSTVTSQSPMFGLDCEMCMTTAKRPELTWVSVINENLETVYNTLVKPYNKVTNYLTRWSGITK ALLDPVNKRLEEVQRDLQKLLPPDAILCGQSLQCDLLALQVNHTLMTFVCEIFNKPLRPDSFSTALVADKEVVDYFGRND IASMESDSDKTTKSLTKSYVQYHDFVYSSFPSFKQCNTKEMTEENKKKLLWKMSRKVVKVLKHVRPNCIVMVVLPGRTDS EGDHNAVCLCKVT |