Gene
Gene Model ID | pfu_aug1.0_1385.1_07924 |
---|---|
Locus | scaffold1385.1 : 22797 ... 28305 : - |
To GenomeBrowser | scaffold1385.1:22797..28305 |
Genes list of scaffold | scaffold1385.1 |
Synonym | pfu_aug2.0_645.1_17675 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_1385.1_07924.t1 | 2 | 1 | zf-AN1 | 194 | 202 | 2.2e-09 | 37.0 | 0.059 | 290.0 | 1.4 |
pfu_aug1.0_1385.1_07924.t1 | 2 | 2 | zf-AN1 | 281 | 322 | 2.2e-09 | 37.0 | 4.5e-13 | 2.2e-09 | 37.0 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_1385.1_07924.t1 | gi|301614127|ref|XP_002936547.1| | 5.0e-39 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 2 |
8-16cell | 1 |
egg-Dshape | 2 |
>Adult tissues | |
mantleEdge | 1 |
Transcript
Transcript ID | pfu_aug1.0_1385.1_07924.t1 |
---|---|
Definition | - |
>pfu_aug1.0_1385.1_07924.t1 atggtggtctgtgacagcgagactgtgagtcgtgatgaattcctgaaatctctgatcgagtacatgtcagacaatggaga agtcaaaacagctcaggagtatatagatgtagacagtgatggaatctatttcttcttccatgaaacacaagaaaaacggg aattcaaacaacgttttatgccatctaacgccatgttttctgacgatgttactgtgacgtcccaaaatattcttaaagaa gaaaagtcatttgcagttaatagtaaatccctagaagattttaagcttgctgagaaacttggtctagtccatatcagtaa aggtgtcgggaaggagagatttatagtggtgtccaaaccaggagctgaggtcaaaaggtcagatggacaagaaggcaagg tcaaagggtcacaaggtcaggtgaaggaggaggtcaaaaagaaggacacacaacaaagttgtaaagatggcaacaaagga aaaaataatactgacagtgacattaggactgtagagaaaatacatgtagaagaaaaggaaaactacggaactgtgctatt agaggataaaaacagtgataaaataacatgtaaacactgctcaaaacctgtgatcaaagccaactttcccctccatgaaa ttcattgtgcgcggcgtcaaaaagagactgcaaaatctgcgaacgaagcaaaatcaggtcagcaagtgaaaagcaaaaga ccaggaagtgccgctaaaaaagtaccgaatgctcattcggatgttactgcaaaattaggtaaagttgatccagatgattt tgatgccttgattgcgactgcacaaactatggatcagggttgcgcgtttaaaaagtgtaaaacaaagacgataacgttag gtcacgtgtgcgagttttgtggtcggaggttctgtctatttcaccacacacccgaggtacatggatgtggcgacgcggct aagtccgcagcaagggcagcggtgattagggagggtgtgttatacagggggagtggtgtaccggataaactccctgaccc cgataggaaagctaggcttcaaaaacgtatggatcagaaactatcagaaatgtcagcgaaaaggcagggaaagaaaaata aaaagtga |
Protein
Protein ID | pfu_aug1.0_1385.1_07924.t1 |
---|---|
Definition | - |
>pfu_aug1.0_1385.1_07924.t1 MVVCDSETVSRDEFLKSLIEYMSDNGEVKTAQEYIDVDSDGIYFFFHETQEKREFKQRFMPSNAMFSDDVTVTSQNILKE EKSFAVNSKSLEDFKLAEKLGLVHISKGVGKERFIVVSKPGAEVKRSDGQEGKVKGSQGQVKEEVKKKDTQQSCKDGNKG KNNTDSDIRTVEKIHVEEKENYGTVLLEDKNSDKITCKHCSKPVIKANFPLHEIHCARRQKETAKSANEAKSGQQVKSKR PGSAAKKVPNAHSDVTAKLGKVDPDDFDALIATAQTMDQGCAFKKCKTKTITLGHVCEFCGRRFCLFHHTPEVHGCGDAA KSAARAAVIREGVLYRGSGVPDKLPDPDRKARLQKRMDQKLSEMSAKRQGKKNKK |