Gene
Gene Model ID | pfu_aug1.0_149.1_65269 |
---|---|
Locus | scaffold149.1 : 120836 ... 156101 : + |
To GenomeBrowser | scaffold149.1:120836..156101 |
Genes list of scaffold | scaffold149.1 |
Synonym | NA |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_149.1_65269.t1 | 1 | 1 | zf-met | 877 | 899 | 3.9e-08 | 33.2 | 2.9e-11 | 1.4e-07 | 31.4 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_149.1_65269.t1 | gi|115944197|ref|XP_001187929.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_149.1_65269.t1 |
---|---|
Definition | - |
>pfu_aug1.0_149.1_65269.t1 atgcggtcagataacaacgagcataacagtcgaaactcgtctgcttcgcatcgtggtggtgcaagtcggaacaacaactc gcaagtgtctaatttcacaaaaccgtacaggaagcaagtactcaaggccctcttcgaaattggccactttcagccctcag attctggtataaagaagaaagactacacatctcataagaaatccaggtcagcatcagaatctgaccaaaacatgattaat aagaaccagcaggatgtgaccaagtcacctaagtcagacggaggatccagaaagccggacaggagagccagattctggaa gttcctctttgacaatctacagagagctgtagatgccatatatgagacatgtgaacaggatgaaagtgtggtagaatgta aagaggttataatgatgctagagcaaagtacaagagacttcaaatcactgatagaaaaacttcacatgctgagagcctat gaggaatcaacaaaggaaggtgacagacctccatctatagcgtgggaggtgaggaagatgtcacctggtaagtcagctgg taatagtcagggaacaagtcgtagctctcctagtccagcacaaagagtcctacaattcagtgaccaaaataaacaagaac caaaagctgtaagtgccactgtatgtggaaacagttgggcagacaaagtaagaggagcctctaccacatccccacagaaa gtgttatctcctacaaccattaaatctccaccacctgtcctgccctcccctcctcctaaacagaatgggcatgcctcaga tgcagatacagatggcagtactacaatagaagatgacaatgaaggatgggaaactgtacatagaggaggaaagggcaagg cccgtaactctccctctcagcgttctttagagaatttgtctggtgtgggaaaagttccagtaaaactgaaacgaacatta tctgatcctcacagtggaatgaacaaacggcctccgtggaatcatggagcaagcaggaggacaccacagaaatctggtcc tcctagtcatcaccttggtgccagcaggcaccgtacagatagtaaagatagtgagaaggaaaacaaaccattagtgaatc atacatcacagcgatctgagaacatacatagaatgtcatcttctccacaaccattacagaactctaacgatcagaaaaca aaggcttcagagtctgtaccagacacagataaaactagcatggacgtgctaaaatctgaggatcccagcgtgatagatgg aatggtggcagggaaggacagcagggaatctgaggagtttacacaggacatcaaagtcatatcacctgtactcgaggaat ccatgactgaagatgaagaagtgaaacagatagataatgcgttacaatctgctatggatgatgaggatcagctgatgtca cagttagaggcagagcaggacctggccctggagacggccatacatgcgttacaatccgctatggatgaggaggatcagct gacatcacagttagaggcagagcaggacctggccctggagacggccatacaggaggaagaatcctggttaaaggagctcg ctagggaggaaaatactgttatagaagtggagacagaaacagagacggaaaatgaattggggaacacaaccagttccctg gagctatcccagcctagcttggactgggatgctatagtagctcagtatgagtctcggtctgagagtgagaggaatcgctc ctggggagacatggttgaggaggatgaggtggaggctagaacaccaggacatgctgtacacatgcatgaaaaactctcat ctccatcaaggaaaagatcacctacagagtccaagaaaagacatgaacagaaacaagcaaaagctagagaactcagagaa aaattattgcaagaaaaagcagaaaggctaaaagacttatctaaaaaggttgaggaagtgagaagttggaaagaggaact gatgcaacaaagaaaaggtacaatacaacgtaaacttcagagggctgaagaaaagcgacaagtacaactcaaaatgaagg cacagaaagctcatgaggaagaggctaaggccaatgagatagcctttataaacacactggaagcccagaataagaagcat gatataatgtccaaacaccagacatcagaagccagactacaagacctacaggaagagaaaaagagaaagcatgaggagaa gctggccaaagaggcagctgtagaagagaggagaaaggccttagaggcagagaggcaggctagactaaaagaaatggagg aaaaacgaaggcagagatctgctagggcagagcaacaacagcttgagagggagaaagaaagagtggaaaatatcagagcc aaggaaagagagcgggaagaaagacttgctgttctaaatgctcaacatcagcaacacattcaagatctgcagaaaaaaat acagcaaaagcaagatgaaactacacagcgtcatcaggaggcgcttcaacaaatacgagaaaaggcgtttgagatgagtg tattacgtcactctactgaggaccacaatgatgtacctaatgttgtgccatatgaaaataagaagctctgcaccatctgt aatgtattgataacatcagaggtatatttgctgagccatttacgaggaaagaaacatcaacaggcattacaggataataa ctctggcaaagccatgtcaaaggaagaaattgaaagtttcaatttgaaacacatagttgatgctcctgtgaacagtaccc atcccaagattgtatcagagaaagaaagacttaaatccatgaaaaagagatcaaagaaattacgtcaaaggatgacgaca agaatacagaagagtgtacgagacattaacagatacttacagacccctgacactggaccctggcctcctaacaaagtgtc cttactagatagagctctcggtgaaattggaaggatcgttgataaaaagaataaccctgtgtataatagtagtgaagcct ctgctgaacgaatgacagtcacaggagccgatggtgttacagtcaggggaaacgatctcataagttacataattaacgtt ggtattgttgataagttaacacagtatttccgtggggtgcagggaccaatagatgacgataaggacggtgccgagttcct acagcatggactaggactgcttgtagctatgaccaaattcatgtccaaaaaaaattctgccatatttgagaaaaagaaga gcgaggatccaacacagctggctagcacatatgaggctacagagcttgtagggattgtctcccttctgtacgggatgtta ctccactcgggtgctccctccagatgcgagacagccccacccttactaccacaacacaccctagctgtcacactcaccgg tctcaaaatgctcaacaatatggcaaccttcaacatagatatgttacagaaatcattaggggaggagggtatgtctttag agtttcgtcacatcgccagtcacttgatgtggtactgtagacatcacgtgacagaggagctcctacatgaggttgtattg agcgtcggctacttcaccgtcctcaacccagataaccaggtggtgatacagtctggtcagtcccccactatcctccagca gttgtgttctctaccgttccagtatttcagtgatccccgtcttacaaacgttttgttcccgactctgatggcctgttgtt acaacaatcagtcaaacagggagattcttgaacaggaacttagctgtgttctactatctaacttcatagaggagaagctc ttagaattacaacaagcacccaaacaaccaagtaagaaagatatttatgaaaataatattgatcattattttaattacag ataa |
Protein
Protein ID | pfu_aug1.0_149.1_65269.t1 |
---|---|
Definition | - |
>pfu_aug1.0_149.1_65269.t1 MRSDNNEHNSRNSSASHRGGASRNNNSQVSNFTKPYRKQVLKALFEIGHFQPSDSGIKKKDYTSHKKSRSASESDQNMIN KNQQDVTKSPKSDGGSRKPDRRARFWKFLFDNLQRAVDAIYETCEQDESVVECKEVIMMLEQSTRDFKSLIEKLHMLRAY EESTKEGDRPPSIAWEVRKMSPGKSAGNSQGTSRSSPSPAQRVLQFSDQNKQEPKAVSATVCGNSWADKVRGASTTSPQK VLSPTTIKSPPPVLPSPPPKQNGHASDADTDGSTTIEDDNEGWETVHRGGKGKARNSPSQRSLENLSGVGKVPVKLKRTL SDPHSGMNKRPPWNHGASRRTPQKSGPPSHHLGASRHRTDSKDSEKENKPLVNHTSQRSENIHRMSSSPQPLQNSNDQKT KASESVPDTDKTSMDVLKSEDPSVIDGMVAGKDSRESEEFTQDIKVISPVLEESMTEDEEVKQIDNALQSAMDDEDQLMS QLEAEQDLALETAIHALQSAMDEEDQLTSQLEAEQDLALETAIQEEESWLKELAREENTVIEVETETETENELGNTTSSL ELSQPSLDWDAIVAQYESRSESERNRSWGDMVEEDEVEARTPGHAVHMHEKLSSPSRKRSPTESKKRHEQKQAKARELRE KLLQEKAERLKDLSKKVEEVRSWKEELMQQRKGTIQRKLQRAEEKRQVQLKMKAQKAHEEEAKANEIAFINTLEAQNKKH DIMSKHQTSEARLQDLQEEKKRKHEEKLAKEAAVEERRKALEAERQARLKEMEEKRRQRSARAEQQQLEREKERVENIRA KEREREERLAVLNAQHQQHIQDLQKKIQQKQDETTQRHQEALQQIREKAFEMSVLRHSTEDHNDVPNVVPYENKKLCTIC NVLITSEVYLLSHLRGKKHQQALQDNNSGKAMSKEEIESFNLKHIVDAPVNSTHPKIVSEKERLKSMKKRSKKLRQRMTT RIQKSVRDINRYLQTPDTGPWPPNKVSLLDRALGEIGRIVDKKNNPVYNSSEASAERMTVTGADGVTVRGNDLISYIINV GIVDKLTQYFRGVQGPIDDDKDGAEFLQHGLGLLVAMTKFMSKKNSAIFEKKKSEDPTQLASTYEATELVGIVSLLYGML LHSGAPSRCETAPPLLPQHTLAVTLTGLKMLNNMATFNIDMLQKSLGEEGMSLEFRHIASHLMWYCRHHVTEELLHEVVL SVGYFTVLNPDNQVVIQSGQSPTILQQLCSLPFQYFSDPRLTNVLFPTLMACCYNNQSNREILEQELSCVLLSNFIEEKL LELQQAPKQPSKKDIYENNIDHYFNYR |