Gene
Gene Model ID | pfu_aug1.0_1535.1_58563 |
---|---|
Locus | scaffold1535.1 : 74515 ... 87725 : - |
To GenomeBrowser | scaffold1535.1:74515..87725 |
Genes list of scaffold | scaffold1535.1 |
Synonym | pfu_aug2.0_1053.1_11399 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_1535.1_58563.t1 | 1 | 1 | Xan_ur_permease | 22 | 126 | 3.4e-23 | 81.7 | 5.5e-27 | 4.1e-23 | 81.5 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_1535.1_58563.t1 | gi|260812002|ref|XP_002600710.1| | hypothetical protein BRAFLDRAFT_83451 [Branchiostoma floridae] | 8.0e-22 |
Transcript
Transcript ID | pfu_aug1.0_1535.1_58563.t1 |
---|---|
Definition | - |
>pfu_aug1.0_1535.1_58563.t1 atgtccgagaactcgagagaacaaaatggagttcccaatggtcaagacaattcaactcaaggattgttgaatgtaacttc agcttctaccaccgacgaaaatatcgacgatgcatggaaaattcgaatgagagaaatagcaagtcgagtcgtatttcaaa ctgcaggtgctataatgattatatgtggattgatcggaaagttcggggctgttctttcaacaattcccgaccctattatt gggggaactcttactgttttatttggaatggtgaccgcggcgggaatttcaaccctgagatttgtagacatgacatcgtc tagaaatgctgcagttctagcgacttctcttataatgggccttatgattccttcttgggtgtccaaacctgagaatagga tagacacagagaagacagtgtccgaccacttgtcttctctgaatctcattcggactcctcgggtgttcacatacatgtat gagctcgctacagccagctga |
Protein
Protein ID | pfu_aug1.0_1535.1_58563.t1 |
---|---|
Definition | - |
>pfu_aug1.0_1535.1_58563.t1 MSENSREQNGVPNGQDNSTQGLLNVTSASTTDENIDDAWKIRMREIASRVVFQTAGAIMIICGLIGKFGAVLSTIPDPII GGTLTVLFGMVTAAGISTLRFVDMTSSRNAAVLATSLIMGLMIPSWVSKPENRIDTEKTVSDHLSSLNLIRTPRVFTYMY ELATAS |