Gene
Gene Model ID | pfu_aug1.0_1562.1_22655 |
---|---|
Locus | scaffold1562.1 : 38410 ... 50405 : - |
To GenomeBrowser | scaffold1562.1:38410..50405 |
Genes list of scaffold | scaffold1562.1 |
Synonym | pfu_aug2.0_64.1_13515 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_1562.1_22655.t1 | 1 | 1 | RhoGAP | 1 | 130 | 2.8e-16 | 59.4 | 3.4e-20 | 5.1e-16 | 58.6 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_1562.1_22655.t1 | gi|242005953|ref|XP_002423824.1| | T-cell activation Rho GTPase-activating protein, putative [Pediculus humanus corporis] | 8.0e-40 |
Transcript
Transcript ID | pfu_aug1.0_1562.1_22655.t1 |
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Definition | - |
>pfu_aug1.0_1562.1_22655.t1 atgcacacggcagatttatttcgtcgtcctggtaaccctggtgataccagacggattgtgaagaggatgtccgaggggaa acctgtgatcttccagaattataacctctatactctcacttctgtagtcaagaaatttttgctgcgtattcctggtggta tatttggtgaagaaggggaggaaactctgctgaaagttttgaatatgaaacacaagatggagcagtatgaagctgtacat gagtatatcatttcgctgagtaagggccatcaacagctggtgtctctattatacggaatatggttcactatgatcaacaa ttccgataaaaatttcatgacaatcgaggctttatctcgtagtgttgctggtagcatgtttcattcttgtgcaatgtcac cagaaaaagtggaaagagccagcaaaatcatgcattttctaatagaaaactttggtgtggctagtatgttcggacaagaa aatatcgagttttttgcggaaacaacacacaccagcattcacatcaaggaaaagttcagatatgaattccagtatccccc agatttgcctcccatcactgaggagggattctttgaacagagggagcatgagcatgaacacgagcatgagcctagtgagt caccaggacattctcctgagctgggactcaagccttaccttagtgtgaacatggaggaggatggcgggtcgagttcctcg cgacttatggctgtatccacaatctctgccccagaggtctctctagttccctcccctggtataatagccaagcagagacc caagtctctagaggataaccttaatgaggcagacgagccagtccaaccccgacccagcttaagtaggttcaactcagtca aacgcaagcagttagagagattacgacagagatctgactggtttcttggaccaaatatgaataatcagggctcttcatca tcatcacatacacaaaatacttgcgtgcattctacacaagacacatctcagaagcttgagagactcaaacaacatacatc agggaattctgtcaccaaggcatcgtctgaaggcatggcattggacgttttgtcatcagatgccgatagcgtgttttcgg acagaagtgaatcaccagcatccgagcctgtacggactccgccaattacggtgacacgtgacatcattcatagtgacaca actacggacgccgcgttagcatccggagatgtcaacatggaggaagtgacaaaggaaccgtgtgacgatggcgatacang agatgaatga |
Protein
Protein ID | pfu_aug1.0_1562.1_22655.t1 |
---|---|
Definition | - |
>pfu_aug1.0_1562.1_22655.t1 MHTADLFRRPGNPGDTRRIVKRMSEGKPVIFQNYNLYTLTSVVKKFLLRIPGGIFGEEGEETLLKVLNMKHKMEQYEAVH EYIISLSKGHQQLVSLLYGIWFTMINNSDKNFMTIEALSRSVAGSMFHSCAMSPEKVERASKIMHFLIENFGVASMFGQE NIEFFAETTHTSIHIKEKFRYEFQYPPDLPPITEEGFFEQREHEHEHEHEPSESPGHSPELGLKPYLSVNMEEDGGSSSS RLMAVSTISAPEVSLVPSPGIIAKQRPKSLEDNLNEADEPVQPRPSLSRFNSVKRKQLERLRQRSDWFLGPNMNNQGSSS SSHTQNTCVHSTQDTSQKLERLKQHTSGNSVTKASSEGMALDVLSSDADSVFSDRSESPASEPVRTPPITVTRDIIHSDT TTDAALASGDVNMEEVTKEPCDDGDTXDE |