Gene
Gene Model ID | pfu_aug1.0_16.1_07283 |
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Locus | scaffold16.1 : 106921 ... 123345 : - |
To GenomeBrowser | scaffold16.1:106921..123345 |
Genes list of scaffold | scaffold16.1 |
Synonym | pfu_aug2.0_2024.1_15359 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_16.1_07283.t1 | 1 | 1 | Fibrinogen_C | 1 | 120 | 2.7e-34 | 118.8 | 2.2e-38 | 3.3e-34 | 118.5 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_16.1_07283.t1 | gi|307951039|gb|ADN97210.1| | fibrinogen-related protein 1 precursor [Mytilus edulis] | 2.0e-28 |
Transcript
Transcript ID | pfu_aug1.0_16.1_07283.t1 |
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Definition | - |
>pfu_aug1.0_16.1_07283.t1 atggatggaaccggcatcttttacagggattgggatgactacaagaaaggctttgggaaaccggacaagaattactggct aggcaatgacattatacatcaactgacggccaacagaaatcatgagttgctgatagttataagggacttcgatgatacag tgagatatgcccgttacggaactttctctatcggaagtgagaaggaaaaatataaactaaatgtaacaggatacagcggg aatgcaggtgatagcttaacctttcataatggatctcaattcagcacccatgatcaggataacgacagcgatataaagac atgcgcggtcttctataaaggggggttctacagtaagcaagttaactag |
Protein
Protein ID | pfu_aug1.0_16.1_07283.t1 |
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Definition | - |
>pfu_aug1.0_16.1_07283.t1 MDGTGIFYRDWDDYKKGFGKPDKNYWLGNDIIHQLTANRNHELLIVIRDFDDTVRYARYGTFSIGSEKEKYKLNVTGYSG NAGDSLTFHNGSQFSTHDQDNDSDIKTCAVFYKGGFYSKQVN |