Gene
Gene Model ID | pfu_aug1.0_16.1_07293 |
---|---|
Locus | scaffold16.1 : 293958 ... 302385 : - |
To GenomeBrowser | scaffold16.1:293958..302385 |
Genes list of scaffold | scaffold16.1 |
Synonym | NA |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_16.1_07293.t1 | 1 | 1 | VHP | 354 | 389 | 1.8e-15 | 56.3 | 5.9e-19 | 4.4e-15 | 55.0 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_16.1_07293.t1 | gi|291241853|ref|XP_002740826.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 2 |
>Adult tissues | |
adductorMuscle | 3 |
Transcript
Transcript ID | pfu_aug1.0_16.1_07293.t1 |
---|---|
Definition | - |
>pfu_aug1.0_16.1_07293.t1 atgacagtggaactagacgaggagagaggtccacagatacgggtagacgagggtaaggagatgccagcgttcctgaattt atttgacggcagaatgatcattcatatcggaaaacgtgaagaagaatcgacaaatactcaaggtcccttcaagtgttatt gtatacgtaatgaatacgatagcgaactttgtcttatagaagtgccaattggtgccgatcaactccggagccactcgtcc atattaattctcaacgttacttcgggtttactctatatttggcatggatgtaaatcgccatctcacaccaaagaacttgc caggacagctgccaaaaatctcaaagaaaaatgtccgttggaagttggcatgaaggaaaaggcatgtatcgagatcaaag aaacagacgaagggtcagaggacaaagatttctggtccgccataggaacgaagaaagaagagaggagtctgtatcataca ttaataaaagatccattaccctatgacaacagtatacgtttattccacatgaccagcgtatcgggcgtgttcgaggtcac ggaggtcatgaacccaacccgagccccagatctcgtcagtcccttccccttcctacaatcagatctctacaaagcctcac aaccagggctatttttagtagacaatcgtcacatcgtttatttatggcacggctggtggccggaggaggacgaacataca gacaacgtacagacgggctcggccaaggccagatttaatatcgatcgtaaatgtgcaatagataccaccatgcaatactg taaagagaaagattctgaccatccccctgtggcttgtgccgtgtatgcgggactagagccgctagaattcaccaaccttt tcccgtactgggaggtcagtgaagctgccaaaaccatcaacctcaaggaaggaaaaatagaaggggagataacaatgcta gaagagattctacagcgagtcacccagactcgatacacgtttgaagaactcactgacgacacattacctgacggtgttga cccactcaaactagagtcatacctagaggaggacgaatttgaagaaattctagacatgccaaaggatgaattttatgcct taccacagtggaagcagaataaactcaaacaacaagttggtctcttctga |
Protein
Protein ID | pfu_aug1.0_16.1_07293.t1 |
---|---|
Definition | - |
>pfu_aug1.0_16.1_07293.t1 MTVELDEERGPQIRVDEGKEMPAFLNLFDGRMIIHIGKREEESTNTQGPFKCYCIRNEYDSELCLIEVPIGADQLRSHSS ILILNVTSGLLYIWHGCKSPSHTKELARTAAKNLKEKCPLEVGMKEKACIEIKETDEGSEDKDFWSAIGTKKEERSLYHT LIKDPLPYDNSIRLFHMTSVSGVFEVTEVMNPTRAPDLVSPFPFLQSDLYKASQPGLFLVDNRHIVYLWHGWWPEEDEHT DNVQTGSAKARFNIDRKCAIDTTMQYCKEKDSDHPPVACAVYAGLEPLEFTNLFPYWEVSEAAKTINLKEGKIEGEITML EEILQRVTQTRYTFEELTDDTLPDGVDPLKLESYLEEDEFEEILDMPKDEFYALPQWKQNKLKQQVGLF |