Gene
Gene Model ID | pfu_aug1.0_16.1_07318 |
---|---|
Locus | scaffold16.1 : 692129 ... 697144 : - |
To GenomeBrowser | scaffold16.1:692129..697144 |
Genes list of scaffold | scaffold16.1 |
Synonym | pfu_aug2.0_1509.1_31724 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_16.1_07318.t1 | 2 | 1 | SLX9 | 10 | 25 | 1.0e-20 | 74.3 | 0.45 | 2200.0 | -1.0 |
pfu_aug1.0_16.1_07318.t1 | 2 | 2 | SLX9 | 88 | 206 | 1.0e-20 | 74.3 | 2.1e-24 | 1.0e-20 | 74.3 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_16.1_07318.t1 | gi|291228689|ref|XP_002734316.1| | PREDICTED: protein FAM207A-like [Saccoglossus kowalevskii] | 1.0e-22 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 2 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_16.1_07318.t1 |
---|---|
Definition | - |
>pfu_aug1.0_16.1_07318.t1 atgggaaagcagaagaggtccagatctaaagcacacatttctgcagtaaaaccaaatggaaagaaaaatgatgcaaatgt tgacaacaacaaagttgacgtagttgattcaatggatacggatgttaaggttcaaaccatggcagattttatcaatagat ctgataacatttttagtgatgtgaagattgatccacaagctctcgccaagaaactaccagattttgatgctagaagcgct attacgagcaagtctctaaaagagctgaaattaaagaaaaaagacaaaaagaagttacgacatgacctttggatcaagaa gttaagtgccatagatgcagccaagaaagaggctaaggaaaagaagaggagacagcagacccctgtggtgggggatatag gggcaatgggcgacgccctacctacattagatctactgatgatgggagacaaaaagaaaaaagagagacctgaggaaaaa ccaagaagtgttcctaaagaaaagaagcggaagaaacaaatgttagacgatatagcactctttcatcaagtcacggcaca tcccgcattcaaagaaaatccaacgtcaacaataaaagaacatttagaaaataaactcaaacaagatgactcgatggaaa cgtaa |
Protein
Protein ID | pfu_aug1.0_16.1_07318.t1 |
---|---|
Definition | - |
>pfu_aug1.0_16.1_07318.t1 MGKQKRSRSKAHISAVKPNGKKNDANVDNNKVDVVDSMDTDVKVQTMADFINRSDNIFSDVKIDPQALAKKLPDFDARSA ITSKSLKELKLKKKDKKKLRHDLWIKKLSAIDAAKKEAKEKKRRQQTPVVGDIGAMGDALPTLDLLMMGDKKKKERPEEK PRSVPKEKKRKKQMLDDIALFHQVTAHPAFKENPTSTIKEHLENKLKQDDSMET |