Gene
Gene Model ID | pfu_aug1.0_17386.1_69084 |
---|---|
Locus | scaffold17386.1 : 296 ... 6099 : + |
To GenomeBrowser | scaffold17386.1:296..6099 |
Genes list of scaffold | scaffold17386.1 |
Synonym | pfu_aug2.0_188.1_27003 |
Manual annotation
Study field | Biomineralization |
---|---|
Gene name | SGMP1 |
Description | reciprocal BLASTN hit to NCBI Accession AB689023 |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_17386.1_69084.t1 | gi|353678108|sp|P86957.1|SGQP_PINMA | Serine, glycine and glutamine-rich protein [Pinctada maxima] | 3.00004e-41 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 3 |
>Adult tissues | |
mantle | 1 |
mantleEdge | 2 |
mantlePallium | 3 |
Transcript
Transcript ID | pfu_aug1.0_17386.1_69084.t1 |
---|---|
Definition | - |
>pfu_aug1.0_17386.1_69084.t1 atgaagacaaccctacttttggtggtgctgttaggcgtggcctactgcgatgacgacgaatggaatatgggcaacttctt ccatcaattccagcaatggcaacagcagagttcatcgtcaagcagtagcagcagtagcagtagtggcggcggaggaggaa gtggtggtggtggcagcagtgggggcggtggaagcagtggaggaggtggatctggtggtggaggttccggtggtggagga tccagcggcggaggtggtgtaactaaagtcgtcctcaaagccggaggaggtggcagtggaggtggtggcggcggcggtgg tggtgtgaccaaagtcgtcaaatcagttggaggaggtggtggtggaacaggaattacaaaacttttgtccttgggcggtt caagcggtggtggctctgtaggtggtggaagccttggtcttgtatcgggaggcggttcaggaggaaagtctgggatcgtg acagttagcaaacaaccaatcatcatcaaccgacaagtcacacatgtaaacaccggaggtagcggtgctggtggcgtcgg tggtggtaaatttggacttggtggtggaggtggatttggcggaagattcggagggcattatggaggttaccatcattaca acccatgtggttatggacacgtttactcatactactatggttgtcagccaatttacaaacagccggtgtaccaaccagta tatcaacagccacttcagactgtttaccaacaaccagtacaaactgtataccaacaaccataccagtatagctacagtca accatcaatcgcattccaaccacagacacagacaacaaaatacatttcctactcgtacccaaagtattactcccagggta gttaccccattgtaggtggatcgcacggaggtttattagggggatcatccggaggtttcgccactggtggttccggagga ttcagctttacatcaggtggaggcggtggtcatgctagctatccagtctcagtctttaaacatgcaaagggagaaaaata caagttataa |
Protein
Protein ID | pfu_aug1.0_17386.1_69084.t1 |
---|---|
Definition | - |
>pfu_aug1.0_17386.1_69084.t1 MKTTLLLVVLLGVAYCDDDEWNMGNFFHQFQQWQQQSSSSSSSSSSSSGGGGGSGGGGSSGGGGSSGGGGSGGGGSGGGG SSGGGGVTKVVLKAGGGGSGGGGGGGGGVTKVVKSVGGGGGGTGITKLLSLGGSSGGGSVGGGSLGLVSGGGSGGKSGIV TVSKQPIIINRQVTHVNTGGSGAGGVGGGKFGLGGGGGFGGRFGGHYGGYHHYNPCGYGHVYSYYYGCQPIYKQPVYQPV YQQPLQTVYQQPVQTVYQQPYQYSYSQPSIAFQPQTQTTKYISYSYPKYYSQGSYPIVGGSHGGLLGGSSGGFATGGSGG FSFTSGGGGGHASYPVSVFKHAKGEKYKL |