Gene
Gene Model ID | pfu_aug1.0_1784.1_08115 |
---|---|
Locus | scaffold1784.1 : 25616 ... 44462 : + |
To GenomeBrowser | scaffold1784.1:25616..44462 |
Genes list of scaffold | scaffold1784.1 |
Synonym | pfu_aug2.0_35.1_16743 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_1784.1_08115.t1 | 1 | 1 | Palm_thioest | 24 | 297 | 0.0 | 425.2 | 0.0 | 0.0 | 425.0 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_1784.1_08115.t1 | gi|260797221|ref|XP_002593602.1| | hypothetical protein BRAFLDRAFT_128749 [Branchiostoma floridae] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 2 |
8-16cell | 1 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_1784.1_08115.t1 |
---|---|
Definition | - |
>pfu_aug1.0_1784.1_08115.t1 atggcagacaactttcacacaatgttgaattctgttttcgttgtttttgcggtttttctcagctgtcatgcatcaccaac cccagttgtcttatggcatggaatgggtgacagttgctgtaatcctctcagtatgggttccattaagggattaattgaga agcttgtacagggagcctatgtcaaatcactggagataggcagtaatattatagaggacactgagaatggtttccttatg ccggtcaacaaacagatagacatagcatgtcaggtcctggccaaagattccaagttacagagcggatacaacgccattgg tttctctcagggaggacagtttttgagagcgatcgcccagagatgcccaaacccgcccatgaagaacttgatttctgtcg gtggacaacatcaaggagtatatggtttccctagatgtccaggggacaacgccacactgtgtgactacgttaggaaattg ttgaatctgggagcttacgtcggcttcgtgcaagatcatttagtgcaggcagagtactggcacgaccctctcaatgaaaa ggaatataaagcaaaaagtatcttcctagctgacctgaaccaagaaaacaaaaggaatgctacagagaaagctaacctcc tgaagttacagaactttgtgttggtgaagttcttagatgacggcatggtagatcctagggacagtgagtggtttgggttc tacaagccaggacagagcaaagaactgtacactctgtttgattcaccactttatacagaggattggctaggcctgaagga gatgaatgccacaggtaggctccacttcctggcgtcccctggggatcatctacagtttacacagcagtggttcatcgata acatcgttaataacttcctcaaataa |
Protein
Protein ID | pfu_aug1.0_1784.1_08115.t1 |
---|---|
Definition | - |
>pfu_aug1.0_1784.1_08115.t1 MADNFHTMLNSVFVVFAVFLSCHASPTPVVLWHGMGDSCCNPLSMGSIKGLIEKLVQGAYVKSLEIGSNIIEDTENGFLM PVNKQIDIACQVLAKDSKLQSGYNAIGFSQGGQFLRAIAQRCPNPPMKNLISVGGQHQGVYGFPRCPGDNATLCDYVRKL LNLGAYVGFVQDHLVQAEYWHDPLNEKEYKAKSIFLADLNQENKRNATEKANLLKLQNFVLVKFLDDGMVDPRDSEWFGF YKPGQSKELYTLFDSPLYTEDWLGLKEMNATGRLHFLASPGDHLQFTQQWFIDNIVNNFLK |