Gene
Gene Model ID | pfu_aug1.0_19091.1_18605 |
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Locus | scaffold19091.1 : 1 ... 10082 : + |
To GenomeBrowser | scaffold19091.1:1..10082 |
Genes list of scaffold | scaffold19091.1 |
Synonym | NA |
Manual annotation
Study field | signal molecules |
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Gene name | catalytic subunit of cAMP-dependent protein kinase |
Description | Catalytic subunit of cAMP-dependent protien kinase partial sequence. BLASTP hit to X63421 (Aplysia californica). |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_19091.1_18605.t1 | 1 | 1 | Pkinase | 1 | 116 | 7.5e-26 | 90.8 | 1.8e-29 | 9.1e-26 | 90.5 |
pfu_aug1.0_19091.1_18605.t1 | 2 | 1 | Pkinase_Tyr | 1 | 99 | 4.7e-09 | 35.6 | 1.6e-12 | 7.7e-09 | 34.9 |
pfu_aug1.0_19091.1_18605.t1 | 2 | 2 | Pkinase_Tyr | 128 | 146 | 4.7e-09 | 35.6 | 0.93 | 4600.0 | -3.7 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_19091.1_18605.t1 | gi|334349625|ref|XP_001381342.2| | 0.0 |
Transcript
Transcript ID | pfu_aug1.0_19091.1_18605.t1 |
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Definition | - |
>pfu_aug1.0_19091.1_18605.t1 gtgacagattttggatttgcaaagaaggtgaagggaaggacctggactctatgtggaactccggaatacctggcaccaga aatcattctcagcaagggatacaacaaggcagttgattggtgggcattaggtgtattagtatatgagatggcagcagggt atcccccgttctttgctgatcaaccaattcagatatatgaaaaaattgtctctggaaaggtacgatttccctctcacttc agccatgacttaaaagaccttctacgttacttactacaagtggacctcacaaaacgctatggcaatctcaaaaatggagt caacgatattaaaaatcataaatggttctcagctaccgactggattgctatatatcaaagaaagacggacagacacatga acagacacatggtaaatgatgaggttactatgatgaagtgccagaactag |
Protein
Protein ID | pfu_aug1.0_19091.1_18605.t1 |
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Definition | - |
>pfu_aug1.0_19091.1_18605.t1 VTDFGFAKKVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLVYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF SHDLKDLLRYLLQVDLTKRYGNLKNGVNDIKNHKWFSATDWIAIYQRKTDRHMNRHMVNDEVTMMKCQN |