Gene
Gene Model ID | pfu_aug1.0_192.1_22051 |
---|---|
Locus | scaffold192.1 : 89406 ... 94443 : + |
To GenomeBrowser | scaffold192.1:89406..94443 |
Genes list of scaffold | scaffold192.1 |
Synonym | pfu_aug2.0_5917.1_26118 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_192.1_22051.t1 | 1 | 1 | PKD_channel | 3 | 333 | 0.0 | 258.5 | 0.0 | 0.0 | 258.3 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_192.1_22051.t1 | gi|198423408|ref|XP_002119703.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_192.1_22051.t1 |
---|---|
Definition | - |
>pfu_aug1.0_192.1_22051.t1 atggtggaagacgaagatccctcaccttgggtttatcaaaactccctcaagctgaggaacgccccatacatggcaaccat cacttcgtacaagggtggtggttacgctgttatgtttgaacgagattacctaagaaacaagaagatgctggagggcttga aaaaccagatatggctagatgagcatgctagaggtgtattcttagaatttactgtatacaacccaaatatcaaccttttt ggatcagttatcatggtcacggaatttatgtcaagtggtggcgctgttgctagacaagaagtcaaggttttcaggttgtt gagctatgttggaggacttggaattttggtactgatatttgaagtgatatacgccctcttcacgttgtatttctttatac ggtgtgtaagaaaagtaaagaaggagaagtgtaaatatttcaaatccttctgggacatattggagtttgtactgctggtt tttgcagtcgctgtcatcgctatgtacgttttcaaacagctgttgacgtcagtggccctcaaagcacttcaggatataga aaaagctgactatgtcaatttccagtccttggctctgtacgatgagatgttcggttggatgtgcgccattgttgtatttc tagctacaatccaattcttgaaacttctacaatttaacaagaaaatggccatgcttggagacacagtaaaactagcatca aaggatctgaaggttttcaccatctcattcctgctgtatttcttcaccttcacaatgaccggatatctccttttcagcac tacaatgctggactacagtaattttgttggttcttcggaggcaatgtttgctttctctctgggtagttttgactttacag ctatgaaggacgctcagcctgtacttggtcccatcttctttttcctgttcataggagttatatatatcggaatgatgagt attttcctgaccattatcgccgatgctttcaccactgtgaaggaagagctagcttccagtcgcaatgaatatgaaatagt tgactatatgatcagacggcttaagggaataatgggctttgcaaaataa |
Protein
Protein ID | pfu_aug1.0_192.1_22051.t1 |
---|---|
Definition | - |
>pfu_aug1.0_192.1_22051.t1 MVEDEDPSPWVYQNSLKLRNAPYMATITSYKGGGYAVMFERDYLRNKKMLEGLKNQIWLDEHARGVFLEFTVYNPNINLF GSVIMVTEFMSSGGAVARQEVKVFRLLSYVGGLGILVLIFEVIYALFTLYFFIRCVRKVKKEKCKYFKSFWDILEFVLLV FAVAVIAMYVFKQLLTSVALKALQDIEKADYVNFQSLALYDEMFGWMCAIVVFLATIQFLKLLQFNKKMAMLGDTVKLAS KDLKVFTISFLLYFFTFTMTGYLLFSTTMLDYSNFVGSSEAMFAFSLGSFDFTAMKDAQPVLGPIFFFLFIGVIYIGMMS IFLTIIADAFTTVKEELASSRNEYEIVDYMIRRLKGIMGFAK |