Gene
Gene Model ID | pfu_aug1.0_192.1_22053 |
---|---|
Locus | scaffold192.1 : 101788 ... 108145 : - |
To GenomeBrowser | scaffold192.1:101788..108145 |
Genes list of scaffold | scaffold192.1 |
Synonym | pfu_aug2.0_1825.1_18555 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_192.1_22053.t1 | 1 | 1 | PKD_channel | 12 | 386 | 0.0 | 291.9 | 0.0 | 0.0 | 291.6 |
pfu_aug1.0_192.1_22053.t1 | 1 | 1 | Ion_trans | 180 | 378 | 6.6e-09 | 35.2 | 3.7e-12 | 1.4e-08 | 34.2 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
egg-4cell | 1 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_192.1_22053.t1 |
---|---|
Definition | - |
>pfu_aug1.0_192.1_22053.t1 atgccatttcgtatactgaaaaagttttatcctgataaagactcttgccaagctattccattaatgcatgcatttgtcag tcaatgtagcagagagtggtctgtccgttttgaggacgataccaagtatagaaccggatggatgtctctaaggtccaatg agacagtagataatctaatgaactacccatggaaacataagtccttattcgacaatgccggtgtcccttatgttggtgaa tttggtgtgtaccctggtggtggatatgttgttgatttgattggcaaaaaagacagagttgtcgaaacattagatgagtt gttagaatttgaatggatcaacaagtactctagagtacttttcatagagttcacagtatataatccccaggctaatatgt tttcaacaatacttattgtatttgaaatgccaaccataggacagttacacatcaattactccattaaaacttttcggctt ttctcatacctcggaggatatggcatattcgttattctaagtgagattgcagctttggcttgtgttgtttatttcatagt gagagaagtcaaaatcttcaaaaggacccgtaccacctatcttaagagtttctggaacattgcagaactagtgaatttgt tattagcgattacagctattgtcatgtacatactacgccacattctaacacagcatgctgttaaaaaggtgacaaaattg agagataaattttacgatttccaaaaagtagcactctgggatgaaacgttcaactttatcctggcatttaccatattcat cgcaatcttaaagcttgtccatattttgcgttttaatcgaaaaatgtcaatgatggccggaattttacgaaatgcagcca aagaactgtcggcatttgttattgtcttcgtccttttcatcttagcctatgcggcatggggctacataatgtttggtcca aaaatggcttcctatcgtagtatgattgacgcaatagagactttgctcaacttttctcttggaagtttcgactatcttgc tttggagaatgcaaacagaattttcggtcctatatttttctttgcattcttttttactataatgttcatccttttgaata tctttgttactattttgaatgaatcgatttctactgtaaaagatgatgtctcaaagcaaaccaacgagtacgaacttgtc gccttcatatggcaaaagcttaaagactggtctggattagatttagatagaatcgtccaggacgtcaaacggaagtatga tataggacccgtgatagaaaagcctttgtgttttgatgaagcagctgaagatattgagcagaaactcctggatatagcat tgagaattgaagcgcttgatttacctctccagacacatgttaaaaggggcaatcaagcagaagctcggccatccacaaga agatttacgcgaattttccctacacttatcagaggaagctctgactgctaa |
Protein
Protein ID | pfu_aug1.0_192.1_22053.t1 |
---|---|
Definition | - |
>pfu_aug1.0_192.1_22053.t1 MPFRILKKFYPDKDSCQAIPLMHAFVSQCSREWSVRFEDDTKYRTGWMSLRSNETVDNLMNYPWKHKSLFDNAGVPYVGE FGVYPGGGYVVDLIGKKDRVVETLDELLEFEWINKYSRVLFIEFTVYNPQANMFSTILIVFEMPTIGQLHINYSIKTFRL FSYLGGYGIFVILSEIAALACVVYFIVREVKIFKRTRTTYLKSFWNIAELVNLLLAITAIVMYILRHILTQHAVKKVTKL RDKFYDFQKVALWDETFNFILAFTIFIAILKLVHILRFNRKMSMMAGILRNAAKELSAFVIVFVLFILAYAAWGYIMFGP KMASYRSMIDAIETLLNFSLGSFDYLALENANRIFGPIFFFAFFFTIMFILLNIFVTILNESISTVKDDVSKQTNEYELV AFIWQKLKDWSGLDLDRIVQDVKRKYDIGPVIEKPLCFDEAAEDIEQKLLDIALRIEALDLPLQTHVKRGNQAEARPSTR RFTRIFPTLIRGSSDC |