Gene
Gene Model ID | pfu_aug1.0_1936.1_00902 |
---|---|
Locus | scaffold1936.1 : 25434 ... 55675 : - |
To GenomeBrowser | scaffold1936.1:25434..55675 |
Genes list of scaffold | scaffold1936.1 |
Synonym | NA |
Manual annotation
Study field | Environmental Response |
---|---|
Gene name | tachykinin receptor-like |
Description | Similar (40%) to XP_002741579.1| PREDICTED: tachykinin receptor-like protein-like [Saccoglossus kowalevskii |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_1936.1_00902.t1 | 1 | 1 | 7TM_GPCR_Srsx | 80 | 358 | 9.6e-13 | 47.8 | 2.8e-16 | 1.4e-12 | 47.3 |
pfu_aug1.0_1936.1_00902.t1 | 1 | 1 | 7tm_1 | 84 | 344 | 0.0 | 193.5 | 0.0 | 0.0 | 193.0 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_1936.1_00902.t1 | gi|291243381|ref|XP_002741579.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues | |
adductorMuscle | 1 |
Transcript
Transcript ID | pfu_aug1.0_1936.1_00902.t1 |
---|---|
Definition | - |
>pfu_aug1.0_1936.1_00902.t1 atgacagagtatgtgaatgacttcagtaattcattgacagttatggaaatcttaccgatacgtaaaaataaaagtattat tttccccttacacttttttgtgaacagttcttccaatatgacttatgtcaatttaagtgatgattttccaaatcaaaatt ctagtgagatgctgcacgtgtcgctgtcacaggaatctttatcaggacttatggtactatatactctaacaacgcttttg tccattagtggaaatatttttgtcgttcttgtttttaccaaaggtcgacattcccggaccgatctccgaccattcctgat taatctggcggtagcagaccttgtcatggcctttttctgtatgcctttcacctttgccgacacaatcatggggcggtggg ttttccccagacctttgtgcaccttagttttgttcgtgcaactttttgccgtcgcggccagtgttttgacaaatatggca atcggaatagaccgcttcttagcagtgacatttccactgagatctcgtgtgacttactctcgctcaaaatacgtcatagc tgtaatatggacgtcatcatttgctttagccgcggtacaattttttgtaggtcgcgcagaaaactttggcgacgttgtaa aatgtatagaagattggccgaacgctggatcacgaagaatatataccattgttttattactctgtacatatattgttcct gttattattctttcaataacatattcaattgttggaattttattatggaagcggaccgctccaggaaatcaagatcatgt gagggatttaaacagactgaggtctaaaatcagaattgtgcgtatgttggtgatagtggtggcagtgtttggaatatgct ggttaccaatccatgtttttactcttattttggatttcaatccagaaatcatgcagccaaaaaccgaggacgaggctatg aacttgaccacaatctttctctgcgttcattggctggcaatgtccaatagctttgctaatccaataatatatggattcac taacgaaaattttagagcggacttggccacgctattttacatgtggtgtccgtgttgtgactgtctccagaaagtgatgc cccgttcactcagtacatcgactcacgagagtgtcatcttacgtcaaagcacgtttcgtcacactcgccatggaatggct gccagaaacatgtcgcgctacctaacgacagacaggtgcgtcacgggacataaccgatacttgtctttgcgacaaagtag caaggaaagtacaacggatgagtga |
Protein
Protein ID | pfu_aug1.0_1936.1_00902.t1 |
---|---|
Definition | - |
>pfu_aug1.0_1936.1_00902.t1 MTEYVNDFSNSLTVMEILPIRKNKSIIFPLHFFVNSSSNMTYVNLSDDFPNQNSSEMLHVSLSQESLSGLMVLYTLTTLL SISGNIFVVLVFTKGRHSRTDLRPFLINLAVADLVMAFFCMPFTFADTIMGRWVFPRPLCTLVLFVQLFAVAASVLTNMA IGIDRFLAVTFPLRSRVTYSRSKYVIAVIWTSSFALAAVQFFVGRAENFGDVVKCIEDWPNAGSRRIYTIVLLLCTYIVP VIILSITYSIVGILLWKRTAPGNQDHVRDLNRLRSKIRIVRMLVIVVAVFGICWLPIHVFTLILDFNPEIMQPKTEDEAM NLTTIFLCVHWLAMSNSFANPIIYGFTNENFRADLATLFYMWCPCCDCLQKVMPRSLSTSTHESVILRQSTFRHTRHGMA ARNMSRYLTTDRCVTGHNRYLSLRQSSKESTTDE |