Gene
Gene Model ID | pfu_aug1.0_2067.1_29963 |
---|---|
Locus | scaffold2067.1 : 1 ... 5136 : + |
To GenomeBrowser | scaffold2067.1:1..5136 |
Genes list of scaffold | scaffold2067.1 |
Synonym | pfu_aug2.0_6942.1_09589 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_2067.1_29963.t1 | 1 | 1 | DUF3161 | 15 | 85 | 8.7e-07 | 28.7 | 1.4e-10 | 1.0e-06 | 28.5 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_2067.1_29963.t1 | gi|196011730|ref|XP_002115728.1| | hypothetical protein TRIADDRAFT_59719 [Trichoplax adhaerens] | 4.0e-12 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 2 |
egg-4cell | 1 |
8-16cell | 1 |
egg-Dshape | 1 |
trochophore | 1 |
>Adult tissues | |
maleGonad | 1 |
mantle | 2 |
pearlSac | 1 |
Transcript
Transcript ID | pfu_aug1.0_2067.1_29963.t1 |
---|---|
Definition | - |
>pfu_aug1.0_2067.1_29963.t1 gttcatgtccagatgtatccccatccagtaagagatcacattccgatgaattcatagagctcacacaggcagaattagac tctgtatcaccgtctatacgtggcagactcaaactcatggaagttaacatggtctacagaatattatggcgacatttcaa agaagaaaaaaacaggggacctttaaatcagagtgatatgtacaaaatgggattgaaagtttcaggttcaaatggacagg ccaaattaaaggtgctaaaagcattgaatctttgcacgctcacaaggaatatggaagtggaactggtgtga |
Protein
Protein ID | pfu_aug1.0_2067.1_29963.t1 |
---|---|
Definition | - |
>pfu_aug1.0_2067.1_29963.t1 SCPDVSPSSKRSHSDEFIELTQAELDSVSPSIRGRLKLMEVNMVYRILWRHFKEEKNRGPLNQSDMYKMGLKVSGSNGQA KLKVLKALNLCTLTRNMEVELV |