Gene
Gene Model ID | pfu_aug1.0_21484.1_62094 |
---|---|
Locus | scaffold21484.1 : 1 ... 9882 : + |
To GenomeBrowser | scaffold21484.1:1..9882 |
Genes list of scaffold | scaffold21484.1 |
Synonym | pfu_aug2.0_812.1_07915 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_21484.1_62094.t1 | 1 | 1 | MobB | 299 | 358 | 2.1e-09 | 37.2 | 9.6e-13 | 4.8e-09 | 36.0 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_21484.1_62094.t1 | gi|297666598|ref|XP_002811608.1| | PREDICTED: polynucleotide 5'-hydroxyl-kinase NOL9 [Pongo abelii] | 1.0e-24 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 2 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_21484.1_62094.t1 |
---|---|
Definition | - |
>pfu_aug1.0_21484.1_62094.t1 atctgacaaaggagtcaaatgaagctgctgacgaatactcaggaccttcatcaagtcataaaggaagggaaagtccctgg agtataggagtgtcgtcaagctctgatgaggaacagacaccggaggattacccaattcatcgcaagaaacatcagcatgc gtcaaaaactcgcgttactgagttggacaatgttgtcatcgtagaggcgaaagaattgggaggtgaatctactacaagtg tagatggagataattcgacattcaagtttaccgaaaaggcatcaaagaagaagatgttgaaagctacagccagaggagat cctgggtcgaaaaggaaaagacatgaaagtattgaaaggaagagagcacatcggtttgaggaggatgttttactgattat tcaagaaagagaagtttgtctgaagggattttgtcgtataaagtgtctatttggtggtgttagaattctagggtataatt tgaaccaacatagtgagaaatttgtagatttttattccccagagagtaatagcttacttacgttatcatgtgatttcccc gctgataatgctgaagctcggaacaaactatcaaacatttactccaaataccgactggatagtcattatgaagacgggcc tcattgtggggatgttgttattgtgttactaaggaaattgacatcatgcagttgtgactacatatcgactattcctccgt acacgaaattgttttctccgtacagtggcgaaagaaataaacattcttactccgagctctctgctgttggagtacattat gtccctaagtacagcaaagtgcgtagattgaagatttctgaggattacacatttattgaggaaaaatggcacagtgcctt aaattctggtgtctgtccggcagttgtggtgtgcggaagcaaaaatacaggaaagtcaacaatgaacagattcctcctta actctacattaaataggaaggaaggattgtactatttggaatgtgatgttggacaaacagagttctctccccctggctgt atatcccttaactatctacaaaatcctgttttggtaagtgtgaagctgtctcctctgacactgaattcattcatgtgcaa gtgttcagagtcaggtgcatcaagtatttcagcgcggtgtaacgggtcattttacggcaacgtcaaatctgcgagaataa gatgcactatagaacgattaaatctcgacttttttgtgacttgtaaatattga |
Protein
Protein ID | pfu_aug1.0_21484.1_62094.t1 |
---|---|
Definition | - |
>pfu_aug1.0_21484.1_62094.t1 LTKESNEAADEYSGPSSSHKGRESPWSIGVSSSSDEEQTPEDYPIHRKKHQHASKTRVTELDNVVIVEAKELGGESTTSV DGDNSTFKFTEKASKKKMLKATARGDPGSKRKRHESIERKRAHRFEEDVLLIIQEREVCLKGFCRIKCLFGGVRILGYNL NQHSEKFVDFYSPESNSLLTLSCDFPADNAEARNKLSNIYSKYRLDSHYEDGPHCGDVVIVLLRKLTSCSCDYISTIPPY TKLFSPYSGERNKHSYSELSAVGVHYVPKYSKVRRLKISEDYTFIEEKWHSALNSGVCPAVVVCGSKNTGKSTMNRFLLN STLNRKEGLYYLECDVGQTEFSPPGCISLNYLQNPVLVSVKLSPLTLNSFMCKCSESGASSISARCNGSFYGNVKSARIR CTIERLNLDFFVTCKY |