Gene
Gene Model ID | pfu_aug1.0_23580.1_26106 |
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Locus | scaffold23580.1 : 5016 ... 9093 : + |
To GenomeBrowser | scaffold23580.1:5016..9093 |
Genes list of scaffold | scaffold23580.1 |
Synonym | NA |
Manual annotation
Study field | Biomineralization |
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Gene name | 60A(gbb)-like |
Description | NCBI BLASTP hit to ref|XP_002407531.1| |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_23580.1_26106.t1 | 1 | 1 | TGFb_propeptide | 25 | 172 | 5.3e-26 | 91.3 | 4.0e-30 | 6.0e-26 | 91.2 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_23580.1_26106.t1 | gi|241623169|ref|XP_002407531.1| | transforming growth factor beta, putative [Ixodes scapularis] | 2.0e-26 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
egg-4cell | 1 |
8-16cell | 1 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_23580.1_26106.t1 |
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Definition | - |
>pfu_aug1.0_23580.1_26106.t1 atggatttttgtagtttatcgttgatttttgtcgtttttgtaaaatttatcaattgcactacgtctggatattatgccga caatggtgtggatcaaacagagcaaatacacgtgatgaatagtagagacaaacgagagctccaacacgagatattgactc ttctgggcctccatcagagaccgaaaccaaaaactctcagcaccaaaaactcggcacctaaattcatggtggacctgtat aagagtataacgtcagataatgggctggtgatagaaaacgacgagaaaacgttccatactcatcataacattacacttgg tgacagttttctccaaccagttgacggaactgacgtcattatgagctttgtcaacagagcaaacagagtagcgcatttga ggcacgagagagacagaacattttatttcgacttcagtaaagttacatctaaagaatcagtgttggggagtgaattaagg ctgtataaagaggctgccaagaaatggaaaaacaacttattcacgg |
Protein
Protein ID | pfu_aug1.0_23580.1_26106.t1 |
---|---|
Definition | - |
>pfu_aug1.0_23580.1_26106.t1 MDFCSLSLIFVVFVKFINCTTSGYYADNGVDQTEQIHVMNSRDKRELQHEILTLLGLHQRPKPKTLSTKNSAPKFMVDLY KSITSDNGLVIENDEKTFHTHHNITLGDSFLQPVDGTDVIMSFVNRANRVAHLRHERDRTFYFDFSKVTSKESVLGSELR LYKEAAKKWKNNLFT |