Gene
Gene Model ID | pfu_aug1.0_248.1_14933 |
---|---|
Locus | scaffold248.1 : 56242 ... 66825 : - |
To GenomeBrowser | scaffold248.1:56242..66825 |
Genes list of scaffold | scaffold248.1 |
Synonym | NA |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_248.1_14933.t1 | 2 | 1 | TPM | 39 | 102 | 6.5e-07 | 29.2 | 7.4e-11 | 1.1e-06 | 28.4 |
pfu_aug1.0_248.1_14933.t1 | 2 | 2 | TPM | 133 | 147 | 6.5e-07 | 29.2 | 0.58 | 8600.0 | -3.5 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues | |
mantle | 1 |
mantleEdge | 2 |
Transcript
Transcript ID | pfu_aug1.0_248.1_14933.t1 |
---|---|
Definition | - |
>pfu_aug1.0_248.1_14933.t1 atggttctggaagagaagtccaatatgtacagggagactaaatccacaaaggataaggccagccgagccgcatacttcgc tacctacctacgatccacggcctggcatccacctaatacatgccaggatgacgtagttatcttcttgtcaagaggggata gacaggtgcggacatcagtgggacctagagctattgacgttataacatctagatgtgtaaaagatgtgtacgagaaagct aaacctgacctaacagcaggctactttgacaaggccatttattacatgatacaaagatacgaacaagccatagtgaataa taattgtgatgacggagaatcagtcataaacgtttccaatttgttatccgacgtgaaagtaagcaacctttcggttaaaa aacggttaaaacgaaagaaacctagcgagggctttttagatttgatttttccgcattacagatcacacagaaacaagaag gcatag |
Protein
Protein ID | pfu_aug1.0_248.1_14933.t1 |
---|---|
Definition | - |
>pfu_aug1.0_248.1_14933.t1 MVLEEKSNMYRETKSTKDKASRAAYFATYLRSTAWHPPNTCQDDVVIFLSRGDRQVRTSVGPRAIDVITSRCVKDVYEKA KPDLTAGYFDKAIYYMIQRYEQAIVNNNCDDGESVINVSNLLSDVKVSNLSVKKRLKRKKPSEGFLDLIFPHYRSHRNKK A |