Gene
Gene Model ID | pfu_aug1.0_2978.1_23136 |
---|---|
Locus | scaffold2978.1 : 3228 ... 13383 : + |
To GenomeBrowser | scaffold2978.1:3228..13383 |
Genes list of scaffold | scaffold2978.1 |
Synonym | pfu_aug2.0_476.1_20818 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_2978.1_23136.t1 | 1 | 1 | Neur_chan_LBD | 3 | 97 | 1.6e-30 | 105.8 | 4.0e-34 | 3.0e-30 | 105.0 |
pfu_aug1.0_2978.1_23136.t1 | 1 | 1 | Neur_chan_memb | 192 | 367 | 3.4e-24 | 86.0 | 6.6e-28 | 4.9e-24 | 85.5 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_2978.1_23136.t1 | gi|115530009|gb|ABJ09676.1| | nicotinic acetylcholine receptor subunit 6 isoform IX [Musca domestica] | 0.0 |
Transcript
Transcript ID | pfu_aug1.0_2978.1_23136.t1 |
---|---|
Definition | - |
>pfu_aug1.0_2978.1_23136.t1 atgaatgaaaagcatctgctgcattacttgtttgtaaaaaataattataacgcattggaacggccggtggacaatgaatc aaagccaatcgttgtcagattcgggatcaccctacaacaaatcattgatgtcgatgagaagaaccagatactacactcca atatttggcttcagatgtattggcgagatgttaaccttgtatgggacccgaaagagtttggcggagtggaagaaattcgt gtacctgcaaagaaagtctggaaaccagacatcttagtctataatagcaacatcccttcatcgcctgcttatggcgtgtt cttatctcagttgatacgctatgccagagcaagtaccaaatatacggatttagttctaagagctaggcgtctttcagata agcttctcagtcagggatatgtttgtgaccaactaacatcgtcactgaagaagttctactgtcgatatggggaactcgtc atacactatgatgtcccactctccagaatgagatcatatggtcagtatccatatatgtcatccttcctatatcgtattcg tgtttcatgttttggtatctacttctgctgtataatgataatgtgttccatgtctatgatgttcacggttatcgtcctta acttccattacagaggaccagactcgcatattataccacgatggatcaaaaagtacataaacggatggttagcgtatctg ttgctgatgaagaaaccagaaaggaagtgtaaagattcacagaaggacatgatagagcggtcgcggcagcgtgacgtcat ggttcatgatcaccaatcaaggaatctgctgaacaccatgatggagacagacgacgaactgagacttgaaaacggaactg tactcacgtcgatcccgactcataacgagacaacatttaacgttgtaaattccaagcccgaacttttatctattctgaaa gaattgaaaagaattacaaacaaatgtcggcgagaggaagaagactttgaagtgagatgtgaatggcgatttgctgcaac cgtaattgaccgtttgtgtctatggatctgtataactttcactttactgtcaacacttgccgttttgttctcggcaccaa cattaatcatcggttga |
Protein
Protein ID | pfu_aug1.0_2978.1_23136.t1 |
---|---|
Definition | - |
>pfu_aug1.0_2978.1_23136.t1 MNEKHLLHYLFVKNNYNALERPVDNESKPIVVRFGITLQQIIDVDEKNQILHSNIWLQMYWRDVNLVWDPKEFGGVEEIR VPAKKVWKPDILVYNSNIPSSPAYGVFLSQLIRYARASTKYTDLVLRARRLSDKLLSQGYVCDQLTSSLKKFYCRYGELV IHYDVPLSRMRSYGQYPYMSSFLYRIRVSCFGIYFCCIMIMCSMSMMFTVIVLNFHYRGPDSHIIPRWIKKYINGWLAYL LLMKKPERKCKDSQKDMIERSRQRDVMVHDHQSRNLLNTMMETDDELRLENGTVLTSIPTHNETTFNVVNSKPELLSILK ELKRITNKCRREEEDFEVRCEWRFAATVIDRLCLWICITFTLLSTLAVLFSAPTLIIG |