Gene
Gene Model ID | pfu_aug1.0_3068.1_23160 |
---|---|
Locus | scaffold3068.1 : 111986 ... 115107 : + |
To GenomeBrowser | scaffold3068.1:111986..115107 |
Genes list of scaffold | scaffold3068.1 |
Synonym | pfu_aug2.0_935.1_17948 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_3068.1_23160.t1 | 3 | 1 | Polysacc_deac_1 | 25 | 117 | 8.0e-06 | 25.4 | 0.00035 | 2.6 | 7.6 |
pfu_aug1.0_3068.1_23160.t1 | 3 | 2 | Polysacc_deac_1 | 322 | 404 | 8.0e-06 | 25.4 | 6.4e-06 | 0.047 | 13.3 |
pfu_aug1.0_3068.1_23160.t1 | 3 | 3 | Polysacc_deac_1 | 463 | 491 | 8.0e-06 | 25.4 | 0.07 | 520.0 | 0.2 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_3068.1_23160.t1 | gi|221108612|ref|XP_002170745.1| | 0.0 |
Transcript
Transcript ID | pfu_aug1.0_3068.1_23160.t1 |
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Definition | - |
>pfu_aug1.0_3068.1_23160.t1 atggacgatgacgtcagtgaatccgtacgtcctttctacgacagactgtttcatcccagtcgcaaaaatcctaatgggtg tccgatcactgcgtctttatacgtgtcatggaagggcactgattataatctgctggactcttaccacaagagaggattcg aaattggttcacattcaaataaaaggataaaaaacagagaacaacttatgggtgctgtgcttgaagagacgagaatggtg accaataacacaaatataccacgatcagatatcactggctggagaagtggctaccttaagacagtgggggacgatcaaat agagacactgaaggaaaatggatatagatatgatataagtctgacatatatcagaagacctgccttaaacggtaagaaca tatttcctatgaccactgactatagatggccgtttccgtgtaacatttggccatgtcctcaaatttctcaccagggattc tgggaagttcccatcaacgccatgtgggactacaaacttgaatatccatgtagttacacagacggatgtcataaccgccc ggaaactgaagaacaagccttcgcatacttgatgactaacttcaataattcttacaatggcaacagggcaccattaggac ttcatcttcacgcaagatttttccagtttacacatatctacagggctatggataaatttgttgttgaaatactcaagaaa ccagatgtatatatcgtgcctgttaataaaatgttggactggatggaagaaccggtcacaatcgacagagcatcaacttt caaaccatggctgtgttcaatccaggtggtgacccctccaataccaccaacaccgccctctcctgctccacccataaatt caaacgactgtatccaaggagacacgtgccgactaccaaactgcttctgtaaagcttttgatcatccgcaattatcaaga ccaaaaattcctcaaatagtttattttgcagtggacgacgttctggacactaacacagccttctttcttgataagatatt tcctgtttctaagaaaaatccaaatggttgtcctataacatactcagtatttgtcctcgataaaggtactgattatagct tggtgagaagattttactccagaggtgtagagatagccacacatagcttacacgatcctgccatctcagaatccaaagag gcactcttacaacatgcaagggcacaacgcgagagagtagccaacaattctgggattccagtggatgatatagtaggttg gagaagccagtatctacagacagcaggggatgatcagggcgacgtactgcagacactgggttaccagtacgacgcttctt atacttacgtacgtagacctcaaactgatcgtaatgtctggccattcacggcagattacgcatggtctgatttaccatgt aatattcatccgtgcttgagaaagtcacacataggtctctggttggtaccggtaaatgctttctggaattatgttaacat gcatatatgtccgtttgctgacgagtgcccgagacagccccctacacatcaacacgtttatcgatacctcttgaagaatt ttgagaactcgtacaatggaaacagagcaccctttggcgtcaatatgcatgctagatggctcgctgaggacagaaacctt attggtatgaacttgtttctgaatgacatattgaagaatgacgacgtgtatgttgttactgtgaagcaaatgcttgattg gatgaaataccccacggaggtcaaggccattagatatttccggccttggcagtgttcagaggaggccaagttggctggca ctggggcgtccggaatccccataccgtcaacacggtcagccgataactctccggtctaa |
Protein
Protein ID | pfu_aug1.0_3068.1_23160.t1 |
---|---|
Definition | - |
>pfu_aug1.0_3068.1_23160.t1 MDDDVSESVRPFYDRLFHPSRKNPNGCPITASLYVSWKGTDYNLLDSYHKRGFEIGSHSNKRIKNREQLMGAVLEETRMV TNNTNIPRSDITGWRSGYLKTVGDDQIETLKENGYRYDISLTYIRRPALNGKNIFPMTTDYRWPFPCNIWPCPQISHQGF WEVPINAMWDYKLEYPCSYTDGCHNRPETEEQAFAYLMTNFNNSYNGNRAPLGLHLHARFFQFTHIYRAMDKFVVEILKK PDVYIVPVNKMLDWMEEPVTIDRASTFKPWLCSIQVVTPPIPPTPPSPAPPINSNDCIQGDTCRLPNCFCKAFDHPQLSR PKIPQIVYFAVDDVLDTNTAFFLDKIFPVSKKNPNGCPITYSVFVLDKGTDYSLVRRFYSRGVEIATHSLHDPAISESKE ALLQHARAQRERVANNSGIPVDDIVGWRSQYLQTAGDDQGDVLQTLGYQYDASYTYVRRPQTDRNVWPFTADYAWSDLPC NIHPCLRKSHIGLWLVPVNAFWNYVNMHICPFADECPRQPPTHQHVYRYLLKNFENSYNGNRAPFGVNMHARWLAEDRNL IGMNLFLNDILKNDDVYVVTVKQMLDWMKYPTEVKAIRYFRPWQCSEEAKLAGTGASGIPIPSTRSADNSPV |