Gene
Gene Model ID | pfu_aug1.0_308.1_29184 |
---|---|
Locus | scaffold308.1 : 19516 ... 27305 : + |
To GenomeBrowser | scaffold308.1:19516..27305 |
Genes list of scaffold | scaffold308.1 |
Synonym | pfu_aug2.0_1666.1_21734 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_308.1_29184.t1 | 4 | 1 | Sushi | 7 | 43 | 1.7e-31 | 108.3 | 3.7e-12 | 2.7e-08 | 34.0 |
pfu_aug1.0_308.1_29184.t1 | 4 | 2 | Sushi | 62 | 103 | 1.7e-31 | 108.3 | 1.9e-10 | 1.4e-06 | 28.4 |
pfu_aug1.0_308.1_29184.t1 | 4 | 3 | Sushi | 124 | 161 | 1.7e-31 | 108.3 | 8.4e-10 | 6.3e-06 | 26.4 |
pfu_aug1.0_308.1_29184.t1 | 4 | 4 | Sushi | 166 | 223 | 1.7e-31 | 108.3 | 8.1e-11 | 6.0e-07 | 29.7 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_308.1_29184.t1 | gi|242009433|ref|XP_002425490.1| | c4b-binding protein beta chain, putative [Pediculus humanus corporis] | 4.0e-31 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues | |
adductorMuscle | 1 |
Transcript
Transcript ID | pfu_aug1.0_308.1_29184.t1 |
---|---|
Definition | - |
>pfu_aug1.0_308.1_29184.t1 atgataggagtaggcaatgcttttggtacagtgatccagttcaaatgtaaaggaaacttccatttgagtggctctgagga gcgcaggtgtcaggcaaacagaacctggagtggaacggcggcaacatgcagtgcagaaattaagtgtgaatggccgaata aattttggaatggttacgttctcggagagaaaacacacgtgggatctacagtatttttcagctgtcgtgtacgtactaag tttgttggagattactttgatgcaacatgtttgccaaatggcacgtggtcacacccacaaccaacatgctggggacaatg tcaagttccatcaattgagaaggctatattagaaggtgtacgccagggaacctggagggaccacggcacgggcctgagat atcagtgtgtagatggctttgttccccagacctccaaacaacttatgtgtaataatggtacctggtctgacctgcctcag tgtgtaccagctccctgtcgagatatccctcctcccatcaacaacggcctgaggatatacactggtcggcaaaatggtag aaaagcaaagtacatatgtctgaatgggtatcgcctagccgggatggacgtagataatgctaccctgatctgccagcagg gtacttggataggaggagcaccgagatgtgaacaaggtgatcagatcctagtcttttctgatgagattatgatagtgact gtcatagcgtcctattgtaaaggggtcagcgtacaatgcttggaaagatgccgatacaaaaatgttgaaggttaa |
Protein
Protein ID | pfu_aug1.0_308.1_29184.t1 |
---|---|
Definition | - |
>pfu_aug1.0_308.1_29184.t1 MIGVGNAFGTVIQFKCKGNFHLSGSEERRCQANRTWSGTAATCSAEIKCEWPNKFWNGYVLGEKTHVGSTVFFSCRVRTK FVGDYFDATCLPNGTWSHPQPTCWGQCQVPSIEKAILEGVRQGTWRDHGTGLRYQCVDGFVPQTSKQLMCNNGTWSDLPQ CVPAPCRDIPPPINNGLRIYTGRQNGRKAKYICLNGYRLAGMDVDNATLICQQGTWIGGAPRCEQGDQILVFSDEIMIVT VIASYCKGVSVQCLERCRYKNVEG |