Gene
Gene Model ID | pfu_aug1.0_3094.1_30336 |
---|---|
Locus | scaffold3094.1 : 806 ... 19547 : + |
To GenomeBrowser | scaffold3094.1:806..19547 |
Genes list of scaffold | scaffold3094.1 |
Synonym | pfu_aug2.0_885.1_17904 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_3094.1_30336.t1 | 1 | 1 | Kinesin | 15 | 186 | 1.49939e-42 | 145.5 | 2.66247e-44 | 8.00001e-41 | 139.8 |
pfu_aug1.0_3094.1_30336.t1 | 2 | 1 | HHH_3 | 367 | 377 | 3.3e-12 | 46.1 | 0.95 | 2800.0 | -1.7 |
pfu_aug1.0_3094.1_30336.t1 | 2 | 2 | HHH_3 | 407 | 459 | 3.3e-12 | 46.1 | 6.4e-15 | 1.9e-11 | 43.7 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_3094.1_30336.t1 | gi|115735537|ref|XP_797841.2| | 0.0 |
Transcript
Transcript ID | pfu_aug1.0_3094.1_30336.t1 |
---|---|
Definition | - |
>pfu_aug1.0_3094.1_30336.t1 atgcatagcagtcagaccgaagacgaaaaacagatatcaccgtcgcaggtaatagatcttctcgagcccaaggagaatga tttacctatcagggaagacggagaaaagaatatattcataccgggcctggcagagaaggagatacatagctttgacgact ttaaggctttgtttggtccagcttctaacaacagaaccgtagcggctaccaaactaaatgacagatcaagtcggagccac agtatactcatgctgaaggtgacaaagatgcagcagttctctcccttcagggtgttacacggcaaaatgtaccttataga cctggcagggtcggaggacaatagacggacaggaaacaagggaatcagattgaaggaaagtggagccattaacaagtctt tgttcacacttggtgaggtggtagatgccatcaatgctggactggactcgatcggtggatcttgtcactctgtgatgata acaaacattgctccggaggagagatattattatgacacgtactgtacactcaactttgccagtaaaagtaaaaagattgt caacaatactcatgtcagagaaagcactgccaataagatagatgtgttgacccgtaagattccttacatcccagaggagg gtggagtgagtaaagccaaacgaccaaaactggacgccaaaataccagaggagataaacaaacctcctgatccagctcct ttcctcagaagacagaacagacttgaggagacggtcaataaacgtttggaaaagttagaacaaaacctgctaaatcagat gtcacagatggtgccactgaaacaaggaaaacttgaccccgatgttgtcatggaaatccaaagacaaatagatgtaaaca aaaaacagttggtggagttggccagtcacacgcctcctgccacacccaaaaaagttttaactgacaaaacaaatgtagtg gagaatgttacggtgccagaaaccccgatacacgaaaagaagaaagcactgaaaagatccagaagttcatcagaggtaac gtgttctccactgtttgctaaacagcctcgattgttcaggaagaaaggatttaggtcaactgccagtgcttcatcactca gcaaggtcaaacaagaagatgacagagtacctcacccagaaaaactctttaacaatcctgaacttcaagagaaaatgaac acagagtttctagagaagctgaacacatgctcagttaaggaattacaatctctccatactgttggagcgaagcgtgccaa acttatccatgactggagggaaaattatggtgtatttagcaattatgaggatttaaaacagataccaggatttacagaga aatacataactaacctactcaagtgcttcatgtgtgacgtcacaatggaaaacgtcgccaaagtatgtgatgtccgtagt ctagctatcaaatga |
Protein
Protein ID | pfu_aug1.0_3094.1_30336.t1 |
---|---|
Definition | - |
>pfu_aug1.0_3094.1_30336.t1 MHSSQTEDEKQISPSQVIDLLEPKENDLPIREDGEKNIFIPGLAEKEIHSFDDFKALFGPASNNRTVAATKLNDRSSRSH SILMLKVTKMQQFSPFRVLHGKMYLIDLAGSEDNRRTGNKGIRLKESGAINKSLFTLGEVVDAINAGLDSIGGSCHSVMI TNIAPEERYYYDTYCTLNFASKSKKIVNNTHVRESTANKIDVLTRKIPYIPEEGGVSKAKRPKLDAKIPEEINKPPDPAP FLRRQNRLEETVNKRLEKLEQNLLNQMSQMVPLKQGKLDPDVVMEIQRQIDVNKKQLVELASHTPPATPKKVLTDKTNVV ENVTVPETPIHEKKKALKRSRSSSEVTCSPLFAKQPRLFRKKGFRSTASASSLSKVKQEDDRVPHPEKLFNNPELQEKMN TEFLEKLNTCSVKELQSLHTVGAKRAKLIHDWRENYGVFSNYEDLKQIPGFTEKYITNLLKCFMCDVTMENVAKVCDVRS LAIK |