Gene
Gene Model ID | pfu_aug1.0_3094.1_30339 |
---|---|
Locus | scaffold3094.1 : 57147 ... 61835 : - |
To GenomeBrowser | scaffold3094.1:57147..61835 |
Genes list of scaffold | scaffold3094.1 |
Synonym | NA |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_3094.1_30339.t1 | 1 | 1 | SelR | 50 | 168 | 6.89439e-43 | 145.2 | 0.0 | 8.50588e-43 | 145.0 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_3094.1_30339.t1 | gi|50344842|ref|NP_001002094.1| | methionine-R-sulfoxide reductase B3 [Danio rerio] | 2.0e-40 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_3094.1_30339.t1 |
---|---|
Definition | - |
>pfu_aug1.0_3094.1_30339.t1 atggtcgtgccctttgtaacgttaattggcgtgttacaaaacgtccaaatagagtactggatcatgttaatgctcacctt actagctgtatctgtctgtggtttggtggatggtcaagcagtgaacaaacagttgacctttacagatacagagctacagc agaggcttactcctatgcagtactacgtcactcagcaagatggaactgaaccgaaaaacagtggtaaatacctatacaac aaagatcagggaacgtacagctgtgttgtttgtggaaatccaatgtactcctctaaacataagtatgactccaagtcagg ttggccgtcattttatgacgttcttggtggagtggctacagtcaaagatttcacgcacggaatggtaagggacgaggttg tttgctcgaggtgtggcgcccaccatggtcacgtgtttaacgatggtccgccacctacgtacctgagatactgcatcaac tctgcagcaatgatgttcgtatcagaaaacagaagtcaaatgaaatcaaccatgtaa |
Protein
Protein ID | pfu_aug1.0_3094.1_30339.t1 |
---|---|
Definition | - |
>pfu_aug1.0_3094.1_30339.t1 MVVPFVTLIGVLQNVQIEYWIMLMLTLLAVSVCGLVDGQAVNKQLTFTDTELQQRLTPMQYYVTQQDGTEPKNSGKYLYN KDQGTYSCVVCGNPMYSSKHKYDSKSGWPSFYDVLGGVATVKDFTHGMVRDEVVCSRCGAHHGHVFNDGPPPTYLRYCIN SAAMMFVSENRSQMKSTM |