Gene
Gene Model ID | pfu_aug1.0_328.1_36496 |
---|---|
Locus | scaffold328.1 : 51431 ... 64375 : - |
To GenomeBrowser | scaffold328.1:51431..64375 |
Genes list of scaffold | scaffold328.1 |
Synonym | pfu_aug2.0_30.1_00077 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_328.1_36496.t1 | 1 | 1 | TPR_11 | 17 | 88 | 8.0e-10 | 38.2 | 3.3e-12 | 3.5e-09 | 36.1 |
pfu_aug1.0_328.1_36496.t1 | 2 | 1 | SHNi-TPR | 18 | 55 | 6.6e-15 | 54.0 | 2.7e-17 | 2.8e-14 | 52.0 |
pfu_aug1.0_328.1_36496.t1 | 1 | 1 | TPR_12 | 18 | 88 | 4.0e-12 | 45.8 | 6.4e-15 | 6.8e-12 | 45.1 |
pfu_aug1.0_328.1_36496.t1 | 2 | 1 | TPR_1 | 18 | 49 | 1.1e-11 | 43.7 | 1.1e-05 | 0.011 | 15.2 |
pfu_aug1.0_328.1_36496.t1 | 2 | 1 | TPR_2 | 18 | 48 | 6.2e-10 | 38.2 | 1.7e-05 | 0.018 | 14.8 |
pfu_aug1.0_328.1_36496.t1 | 2 | 1 | TPR_8 | 21 | 48 | 3.8e-08 | 32.5 | 2.5e-05 | 0.027 | 14.2 |
pfu_aug1.0_328.1_36496.t1 | 2 | 2 | TPR_1 | 60 | 88 | 1.1e-11 | 43.7 | 4.0e-09 | 4.2e-06 | 26.1 |
pfu_aug1.0_328.1_36496.t1 | 2 | 2 | TPR_2 | 60 | 88 | 6.2e-10 | 38.2 | 2.2e-07 | 0.00023 | 20.8 |
pfu_aug1.0_328.1_36496.t1 | 2 | 2 | TPR_8 | 61 | 88 | 3.8e-08 | 32.5 | 4.8e-07 | 0.0005 | 19.6 |
pfu_aug1.0_328.1_36496.t1 | 2 | 2 | SHNi-TPR | 75 | 88 | 6.6e-15 | 54.0 | 0.53 | 560.0 | -0.2 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_328.1_36496.t1 | gi|56206154|emb|CAI22463.1| | 2.0e-32 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
egg-4cell | 1 |
8-16cell | 1 |
trochophore | 1 |
>Adult tissues | |
Dshape | 1 |
adductorMuscle | 2 |
maleGonad | 3 |
mantle | 1 |
mantleEdge | 1 |
mantlePallium | 1 |
pearlSac | 2 |
Transcript
Transcript ID | pfu_aug1.0_328.1_36496.t1 |
---|---|
Definition | - |
>pfu_aug1.0_328.1_36496.t1 atggcgacgctcgacgccggagatgaagctaaggaagcaaaactgaaggctgctgaatcattcctaaagctgggagaagt cagtctagaaactgaacaatacgagcaggctgtgtcagattttaaggaatgtcttaagatccaggagagtgtcttagaag cggaagacagactactggccgagacacactaccaactgggactagcatatgggtttgacaagaaatatgatgaatctatt acacactataaaaaggcaatacagggcatagaagataaagtagcaaaactgtcaaaggttgtagaagcaaatgcagaaag taaagacaaaggaaaaggattgtttttcagcttttgcgctttatcggttggagctacagtagaagtcagtaaatcagaac aatctacagaagcacagaagaaagcttcagacatcagccatttagtgaggcgaaagcgtaagccagatgaagaagaggag gacaaatctgacagtaaaaagacaaaacaagaagacggctcaggtgatgctcctactaaacagaacggtatagccaagtc cccaagcaagtctatggatgttgaagaacaaaagaagatagaagctgcagccaatcaacccaaggaggctgtggcatcgt ga |
Protein
Protein ID | pfu_aug1.0_328.1_36496.t1 |
---|---|
Definition | - |
>pfu_aug1.0_328.1_36496.t1 MATLDAGDEAKEAKLKAAESFLKLGEVSLETEQYEQAVSDFKECLKIQESVLEAEDRLLAETHYQLGLAYGFDKKYDESI THYKKAIQGIEDKVAKLSKVVEANAESKDKGKGLFFSFCALSVGATVEVSKSEQSTEAQKKASDISHLVRRKRKPDEEEE DKSDSKKTKQEDGSGDAPTKQNGIAKSPSKSMDVEEQKKIEAAANQPKEAVAS |