Gene
Gene Model ID | pfu_aug1.0_328.1_36499 |
---|---|
Locus | scaffold328.1 : 89576 ... 112032 : + |
To GenomeBrowser | scaffold328.1:89576..112032 |
Genes list of scaffold | scaffold328.1 |
Synonym | pfu_aug2.0_30.1_00080 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_328.1_36499.t1 | 1 | 1 | TTL | 126 | 413 | 0.0 | 269.6 | 0.0 | 0.0 | 268.8 |
pfu_aug1.0_328.1_36499.t1 | 4 | 1 | ATPgrasp_YheCD | 186 | 206 | 3.5e-06 | 26.0 | 0.0027 | 5.7 | 5.6 |
pfu_aug1.0_328.1_36499.t1 | 4 | 2 | ATPgrasp_YheCD | 213 | 243 | 3.5e-06 | 26.0 | 0.064 | 140.0 | 1.1 |
pfu_aug1.0_328.1_36499.t1 | 4 | 3 | ATPgrasp_YheCD | 363 | 396 | 3.5e-06 | 26.0 | 1.1e-06 | 0.0023 | 16.7 |
pfu_aug1.0_328.1_36499.t1 | 4 | 4 | ATPgrasp_YheCD | 438 | 473 | 3.5e-06 | 26.0 | 0.59 | 1300.0 | -2.1 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_328.1_36499.t1 | gi|291238973|ref|XP_002739400.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_328.1_36499.t1 |
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Definition | - |
>pfu_aug1.0_328.1_36499.t1 atgccgggagtaaaacagagcccctccctctcctccctatccctggagagacaacaagatgtgaccttgagctctctgac ccagtatgtccgtcgacctggtgctacccagcaaccaacattacagagcgcacggcgccccctggaggagaaaagggagg cagacaagggagacgaccgtcagatcgcccctgtcccaaagaaaaagaggaaaaagaaacacggagttactgccaattta aatggcacacgatatgatgtcattcgacaggtgtgtgagaaatgcaagtttgaaatctgtaaggatgatgatccaaacag ctacctcatatggaacgacagttttgtcgccattgaccgtatctccgatttgaagccttttcagaggataaatcatttcc ctggaatgggagaggtcacacgtaaagactgcctagctcgcaatatgatgaaagtccagaagcatcatcctgaggacttt tcatttgttcctaagacttggattttaccagcagaccatagccttctactcaattatgccaaagatctgaaatcaaaaaa gaaatataaaacttttattgtcaagccttccaatggagcacaggggcatggtattcagctatacagaaatgctgataaaa ttccccctacggagcatttcatcgtacaggaatatgtagacaaaccattcctcttggacggttacaagtttgaccttcgt atttatgtacttgtgacatcatgtgaccctttacgtgttttcatattcaatgacggtcttgtcagaatgagtacagagaa gtaccttccaccacatgaaaataatctgaatcatttatacatgcacttaacaaactactcagtgaacaagcataatgaat tctatgagaaaggtgaatctatggactctggtagcaagaggtcaatacgatattttaatgactacttgcgtcggaatgat tatgatgtagtgttgctatggcgacgtatccatgacatggtggtgaagactctaacagtagcacagccccatttactaca tcagtacaggatgtgtcgtccaggggctcctgccggcagtgatagtgtatgttttgaggtgctaggatttgatgttcttg ttgacaaaaagctgaatccttggttattggagatcaacagatctccaagtttcggaacagatgagaagatcgatcatgag atcaaatttgccatgatagacgacactattagactgctgaatatcaagctgagtgacaagaggaggaattatttcgcaca gaaggccgaggcgcagaaacgcttatttcgtacaacaaagcgtggggagggaggagatatgagtgattatgataaaaaac gacaaagcatagaaaagcggaaagaagaattgaaagaattgttggctcgggtaagaaaagctacagcgagagaagacttt gagaatcgtaacgctggccgctataagagaatcttcccctctgatgacaaggctaaacaacagaaatatatcagtctgat gtcttccatatttggtattttcatgtcaggtcgggcaccggcaatgcagaaagaaattcagaaagtctataacaaccaac taagggaagaagacattttggacatgatagctgagtgtgagactgacgagaaagatggtaaatacttcactagcggcggt aaccgtccattaaggggcccaaagccccttcagagtatgcctgtaagtcaacctagtcctcctgcagaagatgacgatga tgatgaagacgatgatgaagaggagacagaaagtgcctcaccctcaacttcgcccgatccaaaccggcgaggtatacctc tctcagccacaaatcgccgtcctccctccagtagagcagacagtcgtatgagtaatgatgcgtccagcttgtataactct cgaccaaactccggagtgtcgagtattaggtcaaggccagatgataattttctgctgaacgttgtgaaggagagagagga tgaactcactcataaaactttgatggcactgaatgacatgaggataaaatttcccggaaaatcggaccaagaagctgaac tcattcttgatacactgcatgaaaactggaagtttcacaaaccaagaatagcgtcttactggcttgtaaaactggactca attaaacgtagaaaggtaataaacagagtgacatatcttttatctaatacaagattaccagaagtattatcagaatcaag tattactatctttggtacttatgagtaa |
Protein
Protein ID | pfu_aug1.0_328.1_36499.t1 |
---|---|
Definition | - |
>pfu_aug1.0_328.1_36499.t1 MPGVKQSPSLSSLSLERQQDVTLSSLTQYVRRPGATQQPTLQSARRPLEEKREADKGDDRQIAPVPKKKRKKKHGVTANL NGTRYDVIRQVCEKCKFEICKDDDPNSYLIWNDSFVAIDRISDLKPFQRINHFPGMGEVTRKDCLARNMMKVQKHHPEDF SFVPKTWILPADHSLLLNYAKDLKSKKKYKTFIVKPSNGAQGHGIQLYRNADKIPPTEHFIVQEYVDKPFLLDGYKFDLR IYVLVTSCDPLRVFIFNDGLVRMSTEKYLPPHENNLNHLYMHLTNYSVNKHNEFYEKGESMDSGSKRSIRYFNDYLRRND YDVVLLWRRIHDMVVKTLTVAQPHLLHQYRMCRPGAPAGSDSVCFEVLGFDVLVDKKLNPWLLEINRSPSFGTDEKIDHE IKFAMIDDTIRLLNIKLSDKRRNYFAQKAEAQKRLFRTTKRGEGGDMSDYDKKRQSIEKRKEELKELLARVRKATAREDF ENRNAGRYKRIFPSDDKAKQQKYISLMSSIFGIFMSGRAPAMQKEIQKVYNNQLREEDILDMIAECETDEKDGKYFTSGG NRPLRGPKPLQSMPVSQPSPPAEDDDDDEDDDEEETESASPSTSPDPNRRGIPLSATNRRPPSSRADSRMSNDASSLYNS RPNSGVSSIRSRPDDNFLLNVVKEREDELTHKTLMALNDMRIKFPGKSDQEAELILDTLHENWKFHKPRIASYWLVKLDS IKRRKVINRVTYLLSNTRLPEVLSESSITIFGTYE |