Gene
Gene Model ID | pfu_aug1.0_33.1_43420 |
---|---|
Locus | scaffold33.1 : 20056 ... 24667 : + |
To GenomeBrowser | scaffold33.1:20056..24667 |
Genes list of scaffold | scaffold33.1 |
Synonym | pfu_aug2.0_5309.1_32778 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_33.1_43420.t1 | 1 | 1 | EBP | 1 | 118 | 2.89999e-41 | 140.6 | 2.8026e-45 | 3.30006e-41 | 140.4 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_33.1_43420.t1 | gi|148224966|ref|NP_001080469.1| | emopamil binding protein (sterol isomerase) [Xenopus laevis] | 5.0e-40 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
egg-4cell | 1 |
8-16cell | 1 |
egg-Dshape | 1 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_33.1_43420.t1 |
---|---|
Definition | - |
>pfu_aug1.0_33.1_43420.t1 atgtggaaggagtacgggaaaggggacagccgttatatcacgtcagacacattcacggtgtgtatggagactataacggc ggtgattgacggtccactcagtctgctgaccgcccacgccattctaaaccacgcccctcatcgatatttcctccagctca ccgtgtctctctgtcagctgtacggcgattctctatactacatgacagagattagggagggattcaaacacggagaactc tggcatccgttacacttttggttttattttgtttttcttaacgcattttggatcattattccattaactttgattggaca agcaggaaaacgaatcagccaatcacagtcattgtatgacaaagacagaagaaccaactcgaagaaaaagtcaaaatag |
Protein
Protein ID | pfu_aug1.0_33.1_43420.t1 |
---|---|
Definition | - |
>pfu_aug1.0_33.1_43420.t1 MWKEYGKGDSRYITSDTFTVCMETITAVIDGPLSLLTAHAILNHAPHRYFLQLTVSLCQLYGDSLYYMTEIREGFKHGEL WHPLHFWFYFVFLNAFWIIIPLTLIGQAGKRISQSQSLYDKDRRTNSKKKSK |