Gene
Gene Model ID | pfu_aug1.0_3348.1_37566 |
---|---|
Locus | scaffold3348.1 : 17096 ... 26466 : + |
To GenomeBrowser | scaffold3348.1:17096..26466 |
Genes list of scaffold | scaffold3348.1 |
Synonym | NA |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_3348.1_37566.t1 | 1 | 1 | RIO1 | 175 | 283 | 3.8e-31 | 107.9 | 4.9e-35 | 7.3e-31 | 106.9 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_3348.1_37566.t1 | gi|57525667|ref|NP_001003614.1| | serine/threonine-protein kinase RIO3 [Danio rerio] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_3348.1_37566.t1 |
---|---|
Definition | - |
>pfu_aug1.0_3348.1_37566.t1 atgaaggagccagattttggcgagcttgttgctgctgccgctgccagtggagaggacacagccaatgatttattattagc acagatgttacaacatgagtttgataaagaacacgaccaacagctgaagagggaggaaagccattataacggaaacaaca aagttgctgtgtcctttcaaaacttccgtgcagtacatccagcttacgatgatgaagaagaagaggaagaagaagtaacg gaaagaaaaacagaatgggatgtgtcacctccaagttacaagaaaaacggaacgtcaggaagtgggaaaaatataacaac taagcacgatgctgtaatatgtggaagacgcaatgcatccaagctcatggacctacccccagaattccacagtggtgatg gtgagggaatggacttgaagctttctaacaaagtatacaacaaactgaagttacattccgaagcagaaaataaacggagc cagaggctacatgagaaaaaggagcattccactgcggataagacattgtcagaggagtgtgctatcaagatttataagac aacgctgaatgaattcaaaaacagagaacagtacatacatggagatcataggttctcaaaggatgactataaaaaacaca atccacggaaaattatcaaaatgtggggagagaaagaaaccgctaatctcaacagaatgaagaaattcgggatcccctgt ccccacgtacagttgttaaggaagcacattcttgtgatgtcatttatcggtaaagatggtaaacctgcatcgaagctgaa agacgcctgccttgatacagccgatctggaggtcgcttatgctcaaatggaagattttttccgtaaaagtggtgttcatg acgtattgagcccagaagaattattcaaccatatcacagacctcaaaatcaccggtaaaggaaaagacttcgaggctcag gtacaaagatacgacaaagaaaagagcgccgagctcttagccaatcagagcagctttaaaacctacccatttgactattt cttcgagaagtcattgaaagagaggacagaggagtgtgacgatgaaaatttagatgatagggacgatccatttgaatatt tttacgaaaaatctttaaaggacaaagaaggtgcggaggcccaagtttcctctgatagtgacagtgacatagatgaaagt agctttgtattagtggataaagacaaaattaacttgggataa |
Protein
Protein ID | pfu_aug1.0_3348.1_37566.t1 |
---|---|
Definition | - |
>pfu_aug1.0_3348.1_37566.t1 MKEPDFGELVAAAAASGEDTANDLLLAQMLQHEFDKEHDQQLKREESHYNGNNKVAVSFQNFRAVHPAYDDEEEEEEEVT ERKTEWDVSPPSYKKNGTSGSGKNITTKHDAVICGRRNASKLMDLPPEFHSGDGEGMDLKLSNKVYNKLKLHSEAENKRS QRLHEKKEHSTADKTLSEECAIKIYKTTLNEFKNREQYIHGDHRFSKDDYKKHNPRKIIKMWGEKETANLNRMKKFGIPC PHVQLLRKHILVMSFIGKDGKPASKLKDACLDTADLEVAYAQMEDFFRKSGVHDVLSPEELFNHITDLKITGKGKDFEAQ VQRYDKEKSAELLANQSSFKTYPFDYFFEKSLKERTEECDDENLDDRDDPFEYFYEKSLKDKEGAEAQVSSDSDSDIDES SFVLVDKDKINLG |