Gene
Gene Model ID | pfu_aug1.0_3465.1_01461 |
---|---|
Locus | scaffold3465.1 : 27166 ... 39572 : + |
To GenomeBrowser | scaffold3465.1:27166..39572 |
Genes list of scaffold | scaffold3465.1 |
Synonym | pfu_aug2.0_1242.1_08275 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_3465.1_01461.t1 | 1 | 1 | Amidohydro_5 | 39 | 107 | 3.3e-13 | 49.2 | 1.8e-16 | 5.4e-13 | 48.5 |
pfu_aug1.0_3465.1_01461.t1 | 2 | 1 | Amidohydro_4 | 64 | 148 | 1.7e-06 | 28.3 | 1.9e-09 | 5.7e-06 | 26.5 |
pfu_aug1.0_3465.1_01461.t1 | 1 | 1 | Amidohydro_1 | 69 | 268 | 1.7e-10 | 41.0 | 8.3e-14 | 2.5e-10 | 40.5 |
pfu_aug1.0_3465.1_01461.t1 | 2 | 2 | Amidohydro_4 | 190 | 254 | 1.7e-06 | 28.3 | 0.36 | 1100.0 | -0.6 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_3465.1_01461.t1 | gi|291238428|ref|XP_002739127.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
egg-4cell | 1 |
egg-Dshape | 2 |
trochophore | 1 |
>Adult tissues | |
Dshape | 2 |
Transcript
Transcript ID | pfu_aug1.0_3465.1_01461.t1 |
---|---|
Definition | - |
>pfu_aug1.0_3465.1_01461.t1 atgtcgcatcgtacaccggtaaagaaagttcccattcatctgcagagtgcccaatccagactgttcatcaaaggaggaaa aatagtcaatgacgatcagagctttgatgcagatatatacatagaagatggcattatcaaacaagttggtaacaatttgg ttatacctggtggggccaggacgattgaagccaaaggcaaacttgttttaccaggaggtattgacacccatactcacatg cagcttccgtttatgggtacacatgccatagatgacttctacagcggtactaaagcagccctggctggaggaactactat gataattgattttgtcctggatcagaagggggtatcattattagaggcgtatgacaagtggagaggatgggctgatggga aggtttgctgtgattacggccttcatgtcggtgtcacatggtggggtccacaagtagccaaggatatggaggttctatgt gcagaaaaaggtattaatagttttaagatgttcttagcctacaaagatgtctttatgttagaagataatgaattatatga aagcttcaaaaaatgtaaacagcttggtgcattggccatggtacatgcagagaatggtcacctgatagcggagaaatcca gggaaatgatacaacttggtataacaggtccagagggacatgagatgtgcaggcctgaagaggttgaggcagaagccact aaccgtgcaatcactatagccaatgaggctaactgtccgctctacgtagtacatgttatgagcaaatctgcagctgatgt tgttacaaatgctcgcagaaaagttatgatcaatttccgaatctgtactatcctctag |
Protein
Protein ID | pfu_aug1.0_3465.1_01461.t1 |
---|---|
Definition | - |
>pfu_aug1.0_3465.1_01461.t1 MSHRTPVKKVPIHLQSAQSRLFIKGGKIVNDDQSFDADIYIEDGIIKQVGNNLVIPGGARTIEAKGKLVLPGGIDTHTHM QLPFMGTHAIDDFYSGTKAALAGGTTMIIDFVLDQKGVSLLEAYDKWRGWADGKVCCDYGLHVGVTWWGPQVAKDMEVLC AEKGINSFKMFLAYKDVFMLEDNELYESFKKCKQLGALAMVHAENGHLIAEKSREMIQLGITGPEGHEMCRPEEVEAEAT NRAITIANEANCPLYVVHVMSKSAADVVTNARRKVMINFRICTIL |