Gene
Gene Model ID | pfu_aug1.0_3465.1_01462 |
---|---|
Locus | scaffold3465.1 : 39726 ... 50260 : + |
To GenomeBrowser | scaffold3465.1:39726..50260 |
Genes list of scaffold | scaffold3465.1 |
Synonym | NA |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_3465.1_01462.t1 | 1 | 1 | Amidohydro_1 | 1 | 39 | 5.4e-08 | 32.8 | 3.8e-11 | 8.0e-08 | 32.3 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_3465.1_01462.t1 | gi|270014888|gb|EFA11336.1| | hypothetical protein TcasGA2_TC010876 [Tribolium castaneum] | 3.0e-35 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
8-16cell | 2 |
>Adult tissues | |
adductorMuscle | 1 |
mantle | 1 |
Transcript
Transcript ID | pfu_aug1.0_3465.1_01462.t1 |
---|---|
Definition | - |
>pfu_aug1.0_3465.1_01462.t1 atggatccatgtagatttgtagctgtaactagtaccaatgctgctaaaatattcaatatctatcctcaaaagggtaggat agcggtaggatctgatgcagatattgtaatttgggaccctaaggaaactcgtaccatctcggctaagactcatcatcaag ccgtagactttaacatctttgagggtatggtctgtcatggtgtccctctgtacgtcataaccaatggacatgtagtacta gaggaaggtcaggtgctcaaattgacgacaaagcgccgagacgggcacagattcgtacatcaaatcctccaggtggaaag tcgtcagggttatggtgaggtcaaggtcagtggcaaggttacgcggggccacagcaatgtgtctaacttccacctgagta ccgcttttaaatgtgaagcttctatcaaacagttactgccttttctgctgatagtttattactgttgtgtcatcaaattc tatcataattaa |
Protein
Protein ID | pfu_aug1.0_3465.1_01462.t1 |
---|---|
Definition | - |
>pfu_aug1.0_3465.1_01462.t1 MDPCRFVAVTSTNAAKIFNIYPQKGRIAVGSDADIVIWDPKETRTISAKTHHQAVDFNIFEGMVCHGVPLYVITNGHVVL EEGQVLKLTTKRRDGHRFVHQILQVESRQGYGEVKVSGKVTRGHSNVSNFHLSTAFKCEASIKQLLPFLLIVYYCCVIKF YHN |