Gene
Gene Model ID | pfu_aug1.0_3465.1_01463 |
---|---|
Locus | scaffold3465.1 : 51776 ... 60686 : + |
To GenomeBrowser | scaffold3465.1:51776..60686 |
Genes list of scaffold | scaffold3465.1 |
Synonym | pfu_aug2.0_9287.1_26318 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_3465.1_01463.t1 | 1 | 1 | Methyltransf_4 | 29 | 212 | 0.0 | 180.7 | 0.0 | 0.0 | 180.5 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_3465.1_01463.t1 | gi|147898699|ref|NP_001084693.1| | tRNA (guanine-N(7)-)-methyltransferase [Xenopus laevis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues | |
maleGonad | 1 |
Transcript
Transcript ID | pfu_aug1.0_3465.1_01463.t1 |
---|---|
Definition | - |
>pfu_aug1.0_3465.1_01463.t1 atggttgttacagaacgaagtcggaataaactgttgcccaacgaattttccgttttgaagtccgttcgccctgttaatcc ccagtctatggattggtcagaactgtaccctgaattcttctctagacatgatggagcacagaacaaatcaagtgcagagt ccaacctatcagaatctaactcatgtaaccaatcaaaagtagagtttgcagacattggctgtgggtatggtggactttta gttgccttatctaccatttttcctgacaaactaatgcttggtatggaaattagaatcaaagtttctgactacgtaaagga gagaatcactgcactaagggaacagcaccgtggacagtatcagaatattgcatgtttacgagcaaatgccatgaagtttt tacccaattttttcgaaaaaggacagttaacaaagatgtttttcctgttccctgatccacatttcaagaagacaaaacat aaatggagaattatcagtcagacactacttgcagagtatgcttatgttctcagagttggtggtatagtgtacacaatcac tgatgtcaaagaccttcatgaatggatggtcaaacatttagatgatttccctttatttcaacggattccagaggaggatt tggtatga |
Protein
Protein ID | pfu_aug1.0_3465.1_01463.t1 |
---|---|
Definition | - |
>pfu_aug1.0_3465.1_01463.t1 MVVTERSRNKLLPNEFSVLKSVRPVNPQSMDWSELYPEFFSRHDGAQNKSSAESNLSESNSCNQSKVEFADIGCGYGGLL VALSTIFPDKLMLGMEIRIKVSDYVKERITALREQHRGQYQNIACLRANAMKFLPNFFEKGQLTKMFFLFPDPHFKKTKH KWRIISQTLLAEYAYVLRVGGIVYTITDVKDLHEWMVKHLDDFPLFQRIPEEDLV |