Gene
Gene Model ID | pfu_aug1.0_352.1_36515 |
---|---|
Locus | scaffold352.1 : 44276 ... 57475 : - |
To GenomeBrowser | scaffold352.1:44276..57475 |
Genes list of scaffold | scaffold352.1 |
Synonym | NA |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_352.1_36515.t1 | 2 | 1 | DAO | 15 | 67 | 1.6e-25 | 89.8 | 2.2e-10 | 5.5e-07 | 28.8 |
pfu_aug1.0_352.1_36515.t1 | 2 | 2 | DAO | 75 | 230 | 1.6e-25 | 89.8 | 5.9e-20 | 1.5e-16 | 60.3 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_352.1_36515.t1 | gi|196013324|ref|XP_002116523.1| | hypothetical protein TRIADDRAFT_60526 [Trichoplax adhaerens] | 9.99967e-42 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 2 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_352.1_36515.t1 |
---|---|
Definition | - |
>pfu_aug1.0_352.1_36515.t1 atgaacaggaagacaacgggttccacagttatcgaccttgtcaaggtttgtgtagtcggggccgggatcataggcctgtc cagcgccgtgcgaatccaggaatcccttggtcagtctgtccatgtgacagttatagctgaccagttttcccctgacacta catctgacggatccggagggttctgggaaccacacctactgaatgatggacaagcacatcttatcagagattttgatgta atagtaaactgtacaggcttaggttcctatacactcatcaatgacactgacatgaaacccatcagaggtcaagttatcaa ggtgaaggcaccatggattaaacatttcatgatcagactggaccccatggacagccacgatgtgatctacatattacctg gaagtaggtatgtaacactgggtggcacgggtcaggtgggagactggaatcgaacagtagacgccaaagacagagagaga atctggaaaggatgtcaaattctagccccaagtctaaaggatgctgaagttattgaagattgggtaggattacgtcctca ccggaccagtgtacgtctggaaatggaaacgaggataaacaatggaagaaagaaaataatcattcataactacggacaca gtggttctggagtgacattacattggggatgtgccaacgatacagccaaactgacaaaacaagcagtggaggaagttagt gccaagtcaaaattgtga |
Protein
Protein ID | pfu_aug1.0_352.1_36515.t1 |
---|---|
Definition | - |
>pfu_aug1.0_352.1_36515.t1 MNRKTTGSTVIDLVKVCVVGAGIIGLSSAVRIQESLGQSVHVTVIADQFSPDTTSDGSGGFWEPHLLNDGQAHLIRDFDV IVNCTGLGSYTLINDTDMKPIRGQVIKVKAPWIKHFMIRLDPMDSHDVIYILPGSRYVTLGGTGQVGDWNRTVDAKDRER IWKGCQILAPSLKDAEVIEDWVGLRPHRTSVRLEMETRINNGRKKIIIHNYGHSGSGVTLHWGCANDTAKLTKQAVEEVS AKSKL |