Gene
Gene Model ID | pfu_aug1.0_3553.1_30446 |
---|---|
Locus | scaffold3553.1 : 62586 ... 67678 : + |
To GenomeBrowser | scaffold3553.1:62586..67678 |
Genes list of scaffold | scaffold3553.1 |
Synonym | NA |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_3553.1_30446.t1 | 1 | 1 | COX3 | 21 | 67 | 8.3e-06 | 25.4 | 6.0e-10 | 8.9e-06 | 25.3 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 3 |
egg-4cell | 1 |
8-16cell | 2 |
egg-Dshape | 2 |
trochophore | 1 |
>Adult tissues | |
Dshape | 1 |
adductorMuscle | 2 |
maleGonad | 1 |
mantle | 1 |
Transcript
Transcript ID | pfu_aug1.0_3553.1_30446.t1 |
---|---|
Definition | - |
>pfu_aug1.0_3553.1_30446.t1 atgcgcggtaaagagagggggggagtaaagcggcccgttacgcgggtaatcccgcgtaccccattccacctgcctgatcc tagcccgtggccattttgggctgcgctgtcattggagggggttcttttggggatggctaagtatttccatggaatagacg caagggttttttttgttaggggagtatttcttgtatatgtcgtacacatgtga |
Protein
Protein ID | pfu_aug1.0_3553.1_30446.t1 |
---|---|
Definition | - |
>pfu_aug1.0_3553.1_30446.t1 MRGKERGGVKRPVTRVIPRTPFHLPDPSPWPFWAALSLEGVLLGMAKYFHGIDARVFFVRGVFLVYVVHM |