Gene
Gene Model ID | pfu_aug1.0_374.1_29220 |
---|---|
Locus | scaffold374.1 : 51339 ... 58925 : - |
To GenomeBrowser | scaffold374.1:51339..58925 |
Genes list of scaffold | scaffold374.1 |
Synonym | pfu_aug2.0_596.1_20954 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_374.1_29220.t1 | 1 | 1 | TLD | 21 | 172 | 1.8e-18 | 66.8 | 1.1e-21 | 3.3e-18 | 66.0 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_374.1_29220.t1 | gi|94733952|emb|CAK04349.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 2 |
>Adult tissues | |
adductorMuscle | 1 |
Transcript
Transcript ID | pfu_aug1.0_374.1_29220.t1 |
---|---|
Definition | - |
>pfu_aug1.0_374.1_29220.t1 atgaacgacaaggaaaaatcctcgctggaagaatggatagggaagaaatgtgattttaagctgctttataaaataagtcg ggatggttgctcgtcacagacattccatactatgtgtgacaaccaggggcctacggtaactgtggtgtataacatcaacc acagtgtctttggtggcttcacattccagaactggaacacttctggtgcatacgtcggcgaccaccaggcatttcttttc cgtttacgacagaatggtcaaagtaatatgaaacagtatccctttctagccaactcaaatggaaataaagctatatattg ccatctaaattatggtccaacgtttggaggtggtcatgacttatttaccttcaatcaaacaactgtccgaacaggaaatt gtttccagctaaacggacattgttatatagggaatacgtttgacagcaaaggcgacgatatatataacattactaatgga cacatgcaagtaacagacttggaagtgtacaaagtgactataaacgatgtcggcgcgggcaagtccagttttttcaactc tgtcacttctattttccgaggaaaactttcaagtcgggcatcaagtggtagtgcagaacacagcataacaacaacgtatc gcatgtacaccgtgcgccaccaaggtcagcctttcaacttccgactatgtgacacccgtggtatagaggatgatattggg ctagatagtcaagatatctgctacattctagatggaaacatctctgatcgctatcaattcaacccatcaattccgatatc aaaagaagccgctggttttatagaggagccaagacttaaggacaagatacactgtgttgtaatagtggtggatgccagta cattagatgtcatgtcagacaaaattacacaaagattaaaggacagtcaaatacggatgaatcagaaaggcattccacaa ataatattccttacgaaactggacaaagtttgcacggaagtggatcaagacgtatcaaatatgtacagaagtcctgcagt aaaggcagccgtggacaaagcagccgacatgtttggactgcctagatcgcacgtgcttcccgcgaaaaactacgagaaag aagacgacttgaatgttaatataaacattatcattctcagagctttgagaaggatgttggattttgctgacgacttcctt gaagaacaactggatcgtcttcagtgcgagaatttgcatgaaatgagcatcaaagattaa |
Protein
Protein ID | pfu_aug1.0_374.1_29220.t1 |
---|---|
Definition | - |
>pfu_aug1.0_374.1_29220.t1 MNDKEKSSLEEWIGKKCDFKLLYKISRDGCSSQTFHTMCDNQGPTVTVVYNINHSVFGGFTFQNWNTSGAYVGDHQAFLF RLRQNGQSNMKQYPFLANSNGNKAIYCHLNYGPTFGGGHDLFTFNQTTVRTGNCFQLNGHCYIGNTFDSKGDDIYNITNG HMQVTDLEVYKVTINDVGAGKSSFFNSVTSIFRGKLSSRASSGSAEHSITTTYRMYTVRHQGQPFNFRLCDTRGIEDDIG LDSQDICYILDGNISDRYQFNPSIPISKEAAGFIEEPRLKDKIHCVVIVVDASTLDVMSDKITQRLKDSQIRMNQKGIPQ IIFLTKLDKVCTEVDQDVSNMYRSPAVKAAVDKAADMFGLPRSHVLPAKNYEKEDDLNVNINIIILRALRRMLDFADDFL EEQLDRLQCENLHEMSIKD |