Gene
Gene Model ID | pfu_aug1.0_3846.1_23423 |
---|---|
Locus | scaffold3846.1 : 60484 ... 66675 : - |
To GenomeBrowser | scaffold3846.1:60484..66675 |
Genes list of scaffold | scaffold3846.1 |
Synonym | pfu_aug2.0_554.1_14308 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_3846.1_23423.t1 | 1 | 1 | HAD_2 | 66 | 192 | 7.0e-21 | 75.2 | 2.8e-24 | 1.0e-20 | 74.6 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_3846.1_23423.t1 | gi|347969692|ref|XP_314226.5| | AGAP003331-PA [Anopheles gambiae str. PEST] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
egg-Dshape | 1 |
trochophore | 1 |
>Adult tissues | |
Dshape | 1 |
adductorMuscle | 1 |
mantle | 1 |
Transcript
Transcript ID | pfu_aug1.0_3846.1_23423.t1 |
---|---|
Definition | - |
>pfu_aug1.0_3846.1_23423.t1 atgaaactggacgcgacacacgtttctaccagatatgatgatgaagagacacaggcagatatatgtgcattaagagaaca agcagtaaaagataaggccaataatgttgatggcacagtcgagattccatctgatggcagtaaggaagatgtcattaagg cagtgttgggcaacgttaagtggcagatggacctcgacagaaaaaccaccgagctgaagcaattacagggtcatatatgg agagaggcctataaaacaggcaaagtgaaagctaaggtgtttgacgatgttagccctaattttgaaaaattggtggagga agagcgattaatatatatatactcatctggaagtattgaggcacaaaaattactgttcaagcacacagaatgtggagatt taagtaaatacatcaaagattactttgacacaacgataggtcccaaaacagaaaaagacagctacgtcaaaatattagaa caaattcaatgtgatcctgaagaagtcttatttctcacagatatgccacaagaggcagaagcagcatcacaggcagggtt aaaaacagcactcgtagcaagggaaggtaatgaggaattaactgacgaacacttcaaaaagttcttagtcatcgaatcgt ttagtgaactatttggtgaggatgatgaagattttaaaaggttagagactgaaggaaatggagaatataatgaagatgat gatgaagatgacgatgaagatgatcttggtgatgatgatgaagatgatccagaggatgatgatggtgaggatgaggagga ggcttga |
Protein
Protein ID | pfu_aug1.0_3846.1_23423.t1 |
---|---|
Definition | - |
>pfu_aug1.0_3846.1_23423.t1 MKLDATHVSTRYDDEETQADICALREQAVKDKANNVDGTVEIPSDGSKEDVIKAVLGNVKWQMDLDRKTTELKQLQGHIW REAYKTGKVKAKVFDDVSPNFEKLVEEERLIYIYSSGSIEAQKLLFKHTECGDLSKYIKDYFDTTIGPKTEKDSYVKILE QIQCDPEEVLFLTDMPQEAEAASQAGLKTALVAREGNEELTDEHFKKFLVIESFSELFGEDDEDFKRLETEGNGEYNEDD DEDDDEDDLGDDDEDDPEDDDGEDEEEA |