Gene
Gene Model ID | pfu_aug1.0_39331.1_62990 |
---|---|
Locus | scaffold39331.1 : 1840 ... 4986 : + |
To GenomeBrowser | scaffold39331.1:1840..4986 |
Genes list of scaffold | scaffold39331.1 |
Synonym | pfu_aug2.0_277.1_23794 |
Manual annotation
Study field | signal molecules |
---|---|
Gene name | Wnt6 |
Description | Blast hits to various animals Wnt6.Best blast hits to amphioxus Wnt6. |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_39331.1_62990.t1 | 1 | 1 | wnt | 2 | 116 | 4.8e-38 | 131.0 | 3.59994e-42 | 5.3e-38 | 130.9 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_39331.1_62990.t1 | gi|260807657|ref|XP_002598625.1| | hypothetical protein BRAFLDRAFT_57222 [Branchiostoma floridae] | 9.0e-35 |
Transcript
Transcript ID | pfu_aug1.0_39331.1_62990.t1 |
---|---|
Definition | - |
>pfu_aug1.0_39331.1_62990.t1 atgttaaaggaaaaatttgacggtgctatacaggtgcaaagttcaaacgacggaaaaagacttgaaacggtgcatcctac tataaaacctccgtctgtacaagatatcgtctattcagaaacttctccgaatttttgtagaagaaataaaaaagttggtt ccatgggaacgaaaggtcggttatgtgatccgacctccataggggtcggagggtgtgacttactatgctgtaatagggga tataaatcggagactatccgacttcgagaaaattgtaaatgtagatttgtttggtgctgtgaagtacattgtcagacttg tgaacacgataaaacattcaacaggtgcttatga |
Protein
Protein ID | pfu_aug1.0_39331.1_62990.t1 |
---|---|
Definition | - |
>pfu_aug1.0_39331.1_62990.t1 MLKEKFDGAIQVQSSNDGKRLETVHPTIKPPSVQDIVYSETSPNFCRRNKKVGSMGTKGRLCDPTSIGVGGCDLLCCNRG YKSETIRLRENCKCRFVWCCEVHCQTCEHDKTFNRCL |